Job Description P39401 Confidence 100.00% Date Thu Jan 5 12:00:36 GMT 2012 Rank 1 Aligned Residues 301 % Identity 18% Template c2w5tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:processed glycerol phosphate lipoteichoic acid PDBTitle: structure-based mechanism of lipoteichoic acid synthesis by2 staphylococcus aureus ltas. Resolution 1.60 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																		.														.	.	.
Query SS confidence																																		.														.	.	.
Query Sequence		E	P	S	K	T	I	P	D	P	K	L	N	L	V	Y	I	Y	G	E	S	L	E	R	T	Y	F	D	N	E	A	F	P	.	D	L	T	P	E	L	G	A	L	K	N	E	G	.	.	.	L	D	F	S	H	T	Q	Q	L	P	G	T	D	Y	T	I	A	G	M	V	A	S	Q	C	G	I	P	L	F	A	P
Query Conservation																																		.														.	.	.
Alig confidence																																		.														.	.	.
Template Conservation
Template Sequence		N	P	E	Y	Y	G	V	A	K	K	K	N	I	I	K	I	H	L	E	S	F	Q	T	F	L	I	N	K	K	V	N	G	K	E	V	T	P	F	L	N	K	L	S	S	G	K	E	Q	F	T	Y	F	P	N	F	F	H	Q	T	G	Q	G	K	T	S	D	S	E	F	T	M	D	N	S	L	Y	G	L	P	Q
Template Known Secondary structure			T	T	T	T	T	T	T	T	T									T	T			G	G	G	T	T				T	T			S	S								T	T		S	S					T	T							T	T	T											S					S	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		F	E	G	N	A	S	A	S	V	S	S	F	F	P	Q	N	I	C	L	G	D	I	L	.	K	N	S	G	Y	Q	N	Y	F	V	Q	G	A	N	L	R	F	A	G	K	D	V	F	L	K	S	H	G	F	D	H	L	Y	G	S	E	E	L	K	S	V	V	A	D	P	H	Y	R	N	D	W	G	F	Y	D	D
Query Conservation																									.
Alig confidence														.	.	.	.								.																																														.	.	.
Template Conservation														.	.	.	.																																																						.	.	.
Template Sequence		G	S	A	F	S	L	K	G	D	N	T	Y	.	.	.	.	Q	S	L	P	A	I	L	D	Q	K	Q	G	Y	K	S	D	V	M	H	G	D	Y	K	T	F	W	N	R	D	Q	V	Y	K	H	F	G	I	D	K	F	Y	D	A	T	Y	Y	D	M	S	D	K	N	V	.	.	.	V	N	L	G	L	K	D	K
Template Known Secondary structure		S						S	T	T	S			.	.	.	.																				S	S		T	T	G	G	G									T							G	G	G	S				G	G	G		.	.	.		T	T
Template Predicted Secondary structure														.	.	.	.																																																						.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.				.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		T	V	L	D	E	A	W	K	K	F	E	E	L	S	R	S	G	Q	R	F	S	L	F	T	L	T	V	D	T	H	H	P	D	G	F	I	S	R	T	C	N	R	K	K	Y	D	F	D	G	K	P	.	N	Q	S	F	S	A	V	S	C	S	Q	E	N	I	A	T	F	I	N	K	I	K	A	S	P	W	F	K
Query Conservation																																																					.
Alig confidence													.	.	.																																						.
Template Conservation													.	.	.
Template Sequence		I	F	F	K	D	S	A	N	Y	Q	A	.	.	.	K	M	K	S	P	F	Y	S	H	L	I	T	L	T	N	H	Y	P	F	T	L	D	E	K	D	A	T	I	E	K	S	N	T	G	D	A	T	V	D	G	Y	I	Q	T	A	R	Y	L	D	E	A	L	E	E	Y	I	N	D	L	K	K	K	G	L	Y	D
Template Known Secondary structure													.	.	.	T	S		S	S									S	S		T	T					G	G	G			S					S	S																													T		S	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400				.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.												410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.			.	450	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query Sequence		D	T	V	I	V	V	S	S	D	H	L	A	M	N	N	T	A	W	K	Y	L	N	K	Q	.	.	.	.	.	.	.	.	.	.	.	D	R	N	N	L	F	F	V	I	R	G	D	K	P	Q	Q	E	T	L	A	V	K	R	N	T	M	D	N	G	A	T	V	L	D	I	L	G	G	D	.	.	N	Y	L	G
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.																																								.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template Conservation
Template Sequence		N	S	V	I	M	I	Y	G	D	H	Y	G	I	S	E	N	H	N	N	A	M	E	K	L	L	G	E	K	I	T	P	A	K	F	T	D	L	N	R	T	G	F	W	I	K	I	P	G	K	S	G	G	I	N	N	E	Y	A	G	Q	V	D	V	M	P	T	I	L	H	L	A	G	I	D	T	K	N	Y	L	M
Template Known Secondary structure		T	S								S		S	S		G	G	G									T	S										T	T	B								T	T												G	G	G										T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	R	S	S	L	S	G	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	T	D	L	F	S	K	G	H
Template Known Secondary structure		S				T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		547	.	.	550	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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