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Job DescriptionP39401
Confidence99.80%DateThu Jan 5 12:00:36 GMT 2012
Rank18Aligned Residues270
% Identity18%Templatec2i09A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:phosphopentomutase; PDBTitle: crystal structure of putative phosphopentomutase from streptococcus2 mutans
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.. .......180..... ....190..... ....200
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Query Sequence  DPKLNLVYIYGESL. . . . . . ERTYFDNEAFPDL. TPELGALKNE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GLDFS
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Template Sequence  STFNRIHLVVLDSVGIGAAPDANNFSNAGVPDGASDTLGHISKTVGLNVPNMAKIGLGNIPRDTPLKTVPAENHPTGYVT
Template Known Secondary structure 


STT


SB
TTGGGSTTGGG

T



TGGGS

SS

TT



SS
SS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   201........210.........220.........230.........240.........250.........260.... ...
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Query Sequence  HTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGAN. . . . . . . . . . . . . LRF
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Template Sequence  KLEEVSLGKDTMTGHWEIMGLNITEPFDTFWNGFPEE. . . . . . . IISKIEKFSGRKVIREANKPYSGTGELIIYTSADPV
Template Known Secondary structure 

SS

STT


SS




TT


.......S

B
GGG
SB





B
SSS
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   82.......90.........100.........110........ .120.........130.........140.........150....
 
   268.270.........280........ .290...
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Query Sequence  AGKDVFLKSHGFDHLYGSEEL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KSVVA
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Template Sequence  LQIAAHEDVIPLDELYRICEYARSITLERPALLGRIIARPTANRHDYALSPFAPTVLNKLADAGVSTYAVGKINDIFNGS
Template Known Secondary structure 

TTTS

SSTTS

S







SS

TT
TTTTTT
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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   294.....300.........310.........320.........330.........340.........350.........360.........370...
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Query Sequence  DPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAT
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Template Sequence  GITNDMGHNKSNSHGVDTLIKTMGL. . SAFTKGFSFTNLVDFDALYGH. . . . . . . . . . . . RRNAHGYRDCLHEFDERLPE
Template Known Secondary structure  T
S



SS
..SS

S
TTT............TT
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   258.260.........270.........280.. .......290.........300... ......310.........320...
 
   374.....380.........390.........400.........410.........420.........430.........440.........450...
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Query Sequence  FINKIKASPWFKDTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNYLGL
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Template Sequence  IIAAMK. . . . . VDDLLLITADHGNDPTYAGT. . . DHTREYVPLLAYSPSFTGNGVLPVGHYADISATIADNFGVDTAM. I
Template Known Secondary structure  T

.....TT
SSB

TTSSSS...S
B
B

TT
S




TTTT



S.S
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   324..... 330.........340......... 350.........360.........370.........380.........390... .
 
   454....
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Query Sequence  GRSSL
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Template Sequence  GESFL
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   395....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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