Job Description P39401 Confidence 99.80% Date Thu Jan 5 12:00:36 GMT 2012 Rank 18 Aligned Residues 270 % Identity 18% Template c2i09A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:phosphopentomutase; PDBTitle: crystal structure of putative phosphopentomutase from streptococcus2 mutans Resolution 2.00 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.																																.	.	.	.	200
Predicted Secondary structure																.	.	.	.	.	.														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	K	L	N	L	V	Y	I	Y	G	E	S	L	.	.	.	.	.	.	E	R	T	Y	F	D	N	E	A	F	P	D	L	.	T	P	E	L	G	A	L	K	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	F	S
Query Conservation																.	.	.	.	.	.														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	F	N	R	I	H	L	V	V	L	D	S	V	G	I	G	A	A	P	D	A	N	N	F	S	N	A	G	V	P	D	G	A	S	D	T	L	G	H	I	S	K	T	V	G	L	N	V	P	N	M	A	K	I	G	L	G	N	I	P	R	D	T	P	L	K	T	V	P	A	E	N	H	P	T	G	Y	V	T
Template Known Secondary structure					S								T	T				S	B		T	T	G	G	G	S			T	T			G	G	G											T											T	G	G	G	S			S	S			T	T					S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.														.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	T	Q	Q	L	P	G	T	D	Y	T	I	A	G	M	V	A	S	Q	C	G	I	P	L	F	A	P	F	E	G	N	A	S	A	S	V	S	S	F	F	P	Q	N	I	C	L	G	D	I	L	K	N	S	G	Y	Q	N	Y	F	V	Q	G	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	F
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		K	L	E	E	V	S	L	G	K	D	T	M	T	G	H	W	E	I	M	G	L	N	I	T	E	P	F	D	T	F	W	N	G	F	P	E	E	.	.	.	.	.	.	.	I	I	S	K	I	E	K	F	S	G	R	K	V	I	R	E	A	N	K	P	Y	S	G	T	G	E	L	I	I	Y	T	S	A	D	P	V
Template Known Secondary structure							S	S			S									T	T				S	S						T	T						.	.	.	.	.	.	.										S			B		G	G	G		S	B							B						S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																																																							.	290	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	K	D	V	F	L	K	S	H	G	F	D	H	L	Y	G	S	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	V	V	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	I	A	A	H	E	D	V	I	P	L	D	E	L	Y	R	I	C	E	Y	A	R	S	I	T	L	E	R	P	A	L	L	G	R	I	I	A	R	P	T	A	N	R	H	D	Y	A	L	S	P	F	A	P	T	V	L	N	K	L	A	D	A	G	V	S	T	Y	A	V	G	K	I	N	D	I	F	N	G	S
Template Known Secondary structure								T	T	T	S																	S	S	T	T	S			S																		S	S										T	T							T	T					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	H	Y	R	N	D	W	G	F	Y	D	D	T	V	L	D	E	A	W	K	K	F	E	E	L	S	R	S	G	Q	R	F	S	L	F	T	L	T	V	D	T	H	H	P	D	G	F	I	S	R	T	C	N	R	K	K	Y	D	F	D	G	K	P	N	Q	S	F	S	A	V	S	C	S	Q	E	N	I	A	T
Query Conservation
Alig confidence																											.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	T	N	D	M	G	H	N	K	S	N	S	H	G	V	D	T	L	I	K	T	M	G	L	.	.	S	A	F	T	K	G	F	S	F	T	N	L	V	D	F	D	A	L	Y	G	H	.	.	.	.	.	.	.	.	.	.	.	.	R	R	N	A	H	G	Y	R	D	C	L	H	E	F	D	E	R	L	P	E
Template Known Secondary structure		T		S							S	S															.	.	S	S			S														T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																											.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.													.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	N	K	I	K	A	S	P	W	F	K	D	T	V	I	V	V	S	S	D	H	L	A	M	N	N	T	A	W	K	Y	L	N	K	Q	D	R	N	N	L	F	F	V	I	R	G	D	K	P	Q	Q	E	T	L	A	V	K	R	N	T	M	D	N	G	A	T	V	L	D	I	L	G	G	D	N	Y	L	G	L
Query Conservation
Alig confidence								.	.	.	.	.																					.	.	.																																													.
Template Conservation								.	.	.	.	.																					.	.	.																																													.
Template Sequence		I	I	A	A	M	K	.	.	.	.	.	V	D	D	L	L	L	I	T	A	D	H	G	N	D	P	T	Y	A	G	T	.	.	.	D	H	T	R	E	Y	V	P	L	L	A	Y	S	P	S	F	T	G	N	G	V	L	P	V	G	H	Y	A	D	I	S	A	T	I	A	D	N	F	G	V	D	T	A	M	.	I
Template Known Secondary structure					T			.	.	.	.	.	T	T								S	S	B			T	T	S	S	S	S	.	.	.	S		B		B									T	T		S										T	T										T	T					S	.	S
Template Predicted Secondary structure								.	.	.	.	.																					.	.	.																																													.
Template SS confidence
		324	.	.	.	.	.						330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.
		454	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	S	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	S	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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