Job Description P39401 Confidence 99.83% Date Thu Jan 5 12:00:36 GMT 2012 Rank 16 Aligned Residues 261 % Identity 19% Template c2gsoB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:phosphodiesterase-nucleotide pyrophosphatase; PDBTitle: structure of xac nucleotide2 pyrophosphatase/phosphodiesterase in complex with vanadate Resolution 1.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		K	L	N	L	V	Y	I	Y	G	E	S	L	E	R	T	Y	F	D	N	E	A	F	P	D	L	T	P	E	L	G	A	L	K	N	E	G	L	D	F	S	H	T	Q	Q	L	P	G	T	.	D	Y	T	I	A	G	M	V	A	S	Q	C	G	I	P	L	F	A	P	F	E	G	N	A	S	A	S	V	S	S	F
Query Conservation																																																		.
Alig confidence																						.	.	.	.																			.	.					.
Template Conservation																						.	.	.	.																			.	.
Template Sequence		P	H	A	L	L	L	I	S	I	D	G	L	R	A	D	M	L	D	R	G	.	.	.	.	I	T	P	N	L	S	H	L	A	R	E	G	V	R	A	R	W	M	.	.	A	P	S	Y	P	S	L	T	F	P	N	H	Y	T	L	V	T	G	L	R	P	D	H	H	G	I	V	H	N	S	M	R	D	P	T	L
Template Known Secondary structure											T	T			G	G	G	G	S	S	S	.	.	.	.	S											S				S			.	.				S	S		S																		S			S	S	S				T	T	T
Template Predicted Secondary structure																						.	.	.	.																			.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		240	.	.	.	.																.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	P	Q	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	L	G	D	I	L	K	N	S	G	Y	Q	N	Y	F	V	Q	G	A	N	L	R	F	A	G	K	D	V	F	L	K	S	H	G	F	D	H	L	Y	G	S	E	E	L	K	S	V	V	A	D	P	H	Y	R	N	D	W	G	F	Y
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	F	W	L	S	K	S	E	A	V	G	D	A	R	W	W	G	G	E	P	V	W	V	G	V	E	N	T	G	Q	H	A	A	T	W	S	W	P	G	S	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	K	G	V	R	P	S	Q	W	R	H	Y	Q	K	G	V	R
Template Known Secondary structure						T	T						T		G	G	G			S										T	T						S	S		T	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	T	T	B			S	B						T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	T	V	L	D	E	A	W	K	K	F	E	E	L	S	R	S	G	Q	R	F	S	L	F	T	L	T	V	D	T	H	H	P	D	G	F	I	S	R	T	C	N	R	K	K	Y	D	F	D	G	K	P	N	Q	S	F	S	A	V	S	C	S	Q	E	N	I	A	T	F	I	N	K	I	K	A	S	P	W	F
Query Conservation
Alig confidence																	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	T	R	V	D	A	V	R	G	W	L	A	T	D	.	G	A	Q	R	N	R	L	V	T	L	Y	F	E	H	V	D	E	A	G	H	D	H	G	P	E	S	R	.	.	.	.	.	.	.	.	.	.	.	Q	Y	A	D	A	V	R	A	V	D	A	A	I	G	R	L	L	A	G	M	Q	R	D	G	T	R
Template Known Secondary structure																	.	G	G	G																					T	T	S		.	.	.	.	.	.	.	.	.	.	.																								T		G
Template Predicted Secondary structure																	.																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.												.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	T	V	I	V	V	S	S	D	H	L	A	M	N	N	T	A	W	K	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	T	N	I	I	V	V	S	D	H	G	M	A	E	V	A	P	G	H	A	I	S	V	E	D	I	A	P	P	Q	I	A	T	A	I	T	D	G	Q	V	I	G	F	E	P	L	P	G	Q	Q	A	A	A	E	A	S	V	L	G	A	H	D	H	Y	D	C	W	R	K	A	E	L	P	A	R	W	Q	Y	G
Template Known Secondary structure		G	G								S								T	T									S		T	T	T							B	S								T	T										S				T	T						G	G	G	S		G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
																																									407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	Q	D	R	N	N	L	F	F	V	I	R	G	D	K	P	Q	Q	E	T	L	A	V	K	R	N	T	M	D	N	G	A	T	V	L	D	I	L	G	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation
Template Sequence		S	H	P	R	I	P	S	L	V	C	Q	M	H	E	G	W	D	A	L	F	P	D	K	L	A	K	R	A	Q	R	G	T	R	G	S	H	G	Y	D	P	A	L	P	S	M	R	A	V	F	L	A	Q	G	P	D	L	A	Q	G	K	T	L	P	G	F	D	N	V	D	V	Y	A	L	M	S	R	L	L	G	I
Template Known Secondary structure			S	T	T	S		S							T	T												S				S							S		T	T	S	G	G	G		B						S	T	T	B		S	S								G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
			447	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	D	N	Y	L	G	L	G	R	S	S	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		P	A	A	P	N	D	G	N	P	A	T	L	L
Template Known Secondary structure					S		S	S		T	T	T	T	G
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions