 |
Job Description | P77364 | Confidence | 65.21% | Date | Thu Jan 5 12:28:12 GMT 2012 |
Rank | 37 | Aligned Residues | 95 |
% Identity | 24% | Template | d1ofua1 |
SCOP info | Tubulin nucleotide-binding domain-like
| Tubulin nucleotide-binding domain-like
| Tubulin, GTPase domain
|
Resolution | 2.1 |
|
 |
  |   |
278 | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | |
|
|
|
|
. | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | Q | A | V | Q | G | A | A | L | V | I | T | G | E | G | R | I | D | S | Q | T | A | G | G | K | A | P | L | G | V | A | S | V | A | K | Q | F | N | V | P | V | I | G | I | A | . |
. |
. |
. |
. |
. |
. |
G | V | L | G | . |
. |
. |
. |
. |
D | G | V | E | V | V | H | Q | Y | G | I | D | A | V | F | S | I | L |
Query Conservation |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|   |
|   | . | . | . | . | . | . | . |
|   |   |   | . | . | . | . | . |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |
|   |
| . |   |
|
|
|
|
|
|
|
|
|
|   |   |
| . |   |
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   | . |   |
|   |
|
|
|
|
|
Template Sequence |   |
I | S | E | V | L | E | G | A | D | M | V | F | I | . |
T | T | G | M | G | G | G | T | G | T | G | A | A | P | . |
I | I | A | E | V | A | K | E | M | G | I | L | T | V | A | V | V | T | R | P | F | P | F | E | G | R | K | R | M | Q | I | A | D | E | G | I | R | A | L | A | E | S | . |
V | D | S | L | I | T | I | P |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
| S |  |  |  |  | . |  |  |  | T | T | S | S |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
|
| G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  | . |  |  |  |
|
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
. | . | 160 | . | . | . | . | . |
  |
  |   |
346 | |
|
|
|
|
|
|
|
. | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . |
Predicted Secondary structure |   |
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | . |
. |
. |
. |
. |
. |
. |
. |
R | L | A | P | L | A | E | V | L | A | S | G | E | T | N | L | F | N | S | A | R | N | I | A | C | A | I | K | I |
Query Conservation |   |
  | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |
Alig confidence |   |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
Template Sequence |   |
N | E | K | L | L | T | I | L | G | K | D | A | S | L | L | A | A | F | A | K | A | D | D | V | L | A | G | A | V | R | G | I | S | D | I | I | K | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|