Return to main results Retrieve Phyre Job Id

Job DescriptionP77364
Confidence36.73%DateThu Jan 5 12:28:12 GMT 2012
Rank109Aligned Residues137
% Identity18%Templatec3hgmD_
PDB info PDB header:signaling proteinChain: D: PDB Molecule:universal stress protein tead; PDBTitle: universal stress protein tead from the trap transporter2 teaabc of halomonas elongata
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150.........160.........170.........180.........190.........200.....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  IRHIILGIGGSATVDGGMGMAQALGVRFLDADGQALAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAA
Query Conservation     









 


 


 


  
 
  
  
   
  
  
  

   
   
  
   

 

 


 
  


Alig confidence 























...............................
















.....


Template Conservation     


 

 
  
  
   
  
...............................
      
         .....   
Template Sequence  FNRIMVPVDGSKGAVKALEKGVGL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QQLTGAELYILCVFKHA. . . . . SLS
Template Known Secondary structure 
S

SS...............................T



.....

S
Template Predicted Secondary structure 





...............................





.....


Template SS confidence 















































































   2.......10.........20..... ....30.........40.. ...
 
   206...210.........220.........230.........240.........250.........260.........270.........280.....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  AVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGA
Query Conservation   







    
  

  
   
         
    

 




 
  
   
 
 
  
 
 
     
   
  
Alig confidence 






































...................

















.


Template Conservation                                         ...................  
  
     
   
  .   
Template Sequence  MARPQLDIPDDALKDYATEIAVQAKTRATELGVPADKVR. . . . . . . . . . . . . . . . . . . AFVKGGRPSRTIVRFARK. REC
Template Known Secondary structure  S







TT

GGG...................S
.TT
Template Predicted Secondary structure 













...................


.

Template SS confidence 















































































   51........60.........70.........80......... 90.........100....... ..110
 
   286...290. ........300.........310.........320..
Predicted Secondary structure 

...











Query SS confidence 





. . .






























Query Sequence  ALVITG. . . EGRIDSQTAGGKAPLGVASVAKQFNVPVIGI
Query Conservation 





...

  
 


 

 
  

  
    



 
Alig confidence 





...



.















...






Template Conservation 



 
       .     

    

  
...  




Template Sequence  DLVVIGAQGTNGD. KSLLLGSVAQRVAGSA. . . HCPVLVV
Template Known Secondary structure  S
SS
TT

.SSS



...SS

Template Predicted Secondary structure 







.






...



Template SS confidence 







































   112.......120.... .....130.........140 .......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions