 |
Job Description | P77364 | Confidence | 22.28% | Date | Thu Jan 5 12:28:12 GMT 2012 |
Rank | 206 | Aligned Residues | 90 |
% Identity | 16% | Template | c3d0qB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:protein calg3; |
PDBTitle: crystal structure of calg3 from micromonospora echinospora determined2 in space group i222
|
Resolution | 2.79 Å |
|
 |
  |   |
272 | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | |
|
. | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | N | A | V | N | L | A | Q | A | V | Q | G | A | A | L | V | I | T | G | E | G | R | I | D | S | Q | T | A | G | G | K | A | P | L | G | V | A | S | V | A | K | Q | F | N | V | P | V | I | G | . |
. |
I | A | G | V | L | G | D | G | V | E | V | V | H | Q | Y | G | I | D | A | V | F | S | I | L | P | R | L | A |
Query Conservation |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|   | . | . |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |   |   |   |   |
Template Sequence |   |
A | V | G | W | T | P | L | H | T | L | L | R | T | C | T | A | V | V | H | H | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | G | T | V | X | T | A | I | D | A | G | I | P | Q | L | L | A | P | D | P | R | D | Q | F | Q | H | T | A | R | E | A | V | S | R | R | G | I | G | L | V | . |
S | T | S | D | K |
Template Known Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  | T | T |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
|
|
| T | T |
| T | T |
|  |  |  |  |  |  |  |  |  |  | T | S |  |  |  | . |
|
| T | T | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | |
. | . | . | 330 | . |
  |
  |   |
350 | . | . | . | . | . | . | . | |
|
. | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | A | E | V | L | A | S | . |
. |
G | E | T | N | L | F | N | S | A | R | N | I | A | C | A | I | K |
Query Conservation |   |
  |
|   |   |
|   |   |   | . | . |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
V | D | A | D | L | L | R | R | L | I | G | D | E | S | L | R | T | A | A | R | E | V | R | E | E | X | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
332 | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|