 |
Job Description | P77364 | Confidence | 31.16% | Date | Thu Jan 5 12:28:12 GMT 2012 |
Rank | 132 | Aligned Residues | 47 |
% Identity | 15% | Template | c2v6bB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:l-lactate dehydrogenase; |
PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form)
|
Resolution | 2.50 Å |
|
  |   |
276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | N | L | A | Q | A | V | Q | G | A | A | L | V | I | T | . |
. |
. |
G | E | G | R | I | D | S | Q | T | A | G | G | K | A | P | L | G | V | A | S | V | A | K | Q | F | N | V | P | V | I | G | I |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|
|
|
|
| . | . | . |
|
|
|   |   |
|   |
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|
|
Template Sequence |   |
H | G | G | H | S | E | L | A | D | A | Q | V | V | I | L | T | A | G | A | E | S | R | L | D | L | L | E | K | N | A | D | I | F | R | E | L | V | P | Q | I | T | R | A | A | P | D | A | V | L | L |
Template Known Secondary structure |   |
 |
|
| G | G | G | G | T | T |
| S |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|