Job Description P0ABM9 Confidence 98.13% Date Thu Jan 5 11:15:51 GMT 2012 Rank 103 Aligned Residues 108 % Identity 24% Template d1ouva_ SCOP info alpha-alpha superhelix HCP-like HCP-like Resolution 2.00

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	E	G	W	I	M	L	G	R	V	G	M	A	L	G	N	A	S	I	A	T	D	A	Y	A	T	A	Y	R	L	D	P	K	N	S	D	A	A	L	G	Y	A	E	A	L	T	R	S	S	D	P	.	N	D	N	R	L	G	G	E	L	L	R	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.																				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		D	P	K	E	L	V	G	L	G	A	K	S	Y	K	E	K	D	F	T	Q	A	K	K	Y	F	E	K	A	C	D	L	.	.	K	E	N	S	G	C	F	N	L	G	V	L	Y	Y	Q	G	Q	G	V	E	K	N	L	K	K	A	A	S	F	Y	A	K	A	C	D	L	N	Y	S	N	G	C	H	L	L	G	N
Template Known Secondary structure																T	T															T	.	.	T															T	S	S	S																	T	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	Y	S	G	Q	G	V	S	Q	N	T	N	K	A	L	Q	Y	Y	S	K	A	C	D	L	K	Y	A	E	G	C	A	S	L	G	G	I	Y	H	D	G	K	V	V	T	R	D	F	K	K	A	V	E	Y	F	T	K	A	C	D	L	N	D	G	D	G	C	T	I	L	G	S	L	Y	D	A	G	R	G	T
Template Known Secondary structure						T	S	S	S																	T	T																S	S	S																	T	T															T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
																																																		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	T	D	H	S	N	I	R	V	L	S	M	Y	A	F	N	A	F	E	.	.	.	.	Q	Q	R	F	G	E	A	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		P	K	D	L	K	K	A	L	A	S	Y	D	K	A	C	D	L	K	D	S	P	G	C	F	N	A	G	N	M	Y	H	H	G	E	G	A	T	K	N	F	K	E	A	L	A	R	Y	S	K	A	C	E	L	E	N	G	G	G	C	F	N	L	G	A	M	Q	Y	N	G	E	G	V	T	R	N	E	K	Q	A	I
Template Known Secondary structure																		T	T															T		S	S																	T	T														T	T	S	S	S	S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	W	E	M	M	L	K	L	L	P	A	N	D	T	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	F	K	K	G	C	K	L	G	A	K	G	A	C	D	I
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions