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Job DescriptionP0ABM9
Confidence99.32%DateThu Jan 5 11:15:51 GMT 2012
Rank80Aligned Residues151
% Identity25%Templatec3sf4B_
PDB info PDB header:signaling protein/protein bindingChain: B: PDB Molecule:g-protein-signaling modulator 2; PDBTitle: crystal structure of the complex between the conserved cell polarity2 proteins inscuteable and lgn
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220. ........230.........240.........250.........260...
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Query Sequence  ALDPKADPLNEEEMSRLALGMRTQLQKNPGD. . . . IEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYA. . .
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Template Conservation 
   
      
    

     

          
     

  
   
    
      

 
               
Template Sequence  LALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASG
Template Known Secondary structure  TTTTT


S
TT
TT
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   20.........30.........40.........50.........60.........70.........80.........90.........
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  NLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGVGEFPEEVRDALQAAVDFYEENLSLV
Template Known Secondary structure  T
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   100.........110.........120.........130.........140.........150.........160.........170.........
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  TALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA
Template Known Secondary structure  TT
T
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   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   264.....270.........280........ .290.........300.........310.........320..
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Query Sequence  . . . . . . . . . . . . . . EALTRSSDPNDNRLGGELLRQLVRT. . . . . . DHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKL.
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Template Conservation                              
       
                  

  
   
    
     


 
 
Template Sequence  RQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS
Template Known Secondary structure  TT
TT
TT
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   266...270.........280.........290.........300.........310.........320.........330.........340.....
 
   323......330.........340.
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Query Sequence  . . . . . LPANDTRRAVIERSIAQAM
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Template Conservation             
   

     

Template Sequence  REVGDKSGELTARLNLSDLQMVLG
Template Known Secondary structure  TT
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   346...350.........360.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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