Job Description P0ABM9 Confidence 94.30% Date Thu Jan 5 11:15:51 GMT 2012 Rank 118 Aligned Residues 102 % Identity 20% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	P	L	N	E	E	E	M	S	R	L	A	L	G	M	R	T	Q	L	Q	K	N	P	G	D	I	E	G	W	I	M	L	G	R	V	G	M	A	L	G	N	A	S	I	A	T	D	A	Y	A	T	A	Y	R	L	D	P	K	N	S	D	A	A	L	G	Y	A	E	A	L	T	R	S	S	D	P	N	D	N
Query Conservation
Alig confidence																					.	.	.	.	.																																	.	.	.	.	.	.	.	.															.	.
Template Conservation																					.	.	.	.	.																																	.	.	.	.	.	.	.	.															.	.
Template Sequence		D	L	A	L	E	Y	G	N	L	D	A	A	L	D	E	A	K	K	L	.	.	.	.	.	N	D	S	I	T	W	E	R	L	I	Q	E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	H	S	F	.	.	.	.	.	.	.	.	D	K	L	S	F	L	Y	L	V	T	G	D	V	N	.	.
Template Known Secondary structure							T	T													.	.	.	.	.																T	T												T	T			.	.	.	.	.	.	.	.											T				.	.
Template Predicted Secondary structure																					.	.	.	.	.																																	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.						.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.									.	.	.	.	.	710	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	G	E	L	L	R	Q	L	V	R	T	D	H	S	N	I	R	V	L	S	M	Y	A	F	N	A	F	E	Q	Q	R	F	G	E	A	V	A	A	W	E	M
Query Conservation
Alig confidence		.	.															.	.	.	.
Template Conservation		.	.															.	.	.	.
Template Sequence		.	.	K	L	S	K	M	Q	N	I	A	Q	T	R	E	D	.	.	.	.	F	G	S	M	L	L	N	T	F	Y	N	N	S	T	K	E	R	S	S	I	F	A	E
Template Known Secondary structure		.	.												T	T		.	.	.	.												T
Template Predicted Secondary structure		.	.															.	.	.	.
Template SS confidence
				719	720	.	.	.	.	.	.	.	.	.	730	.	.					.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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