Job Description P0ABM9 Confidence 85.25% Date Thu Jan 5 11:15:51 GMT 2012 Rank 122 Aligned Residues 114 % Identity 11% Template c3lpzA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:get4 (yor164c homolog); PDBTitle: crystal structure of c. therm. get4 Resolution 1.98 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.						.																														.	.
Query SS confidence																	.	.	.	.						.																														.	.
Query Sequence		E	M	S	R	L	A	L	G	M	R	T	Q	L	Q	K	.	.	.	.	N	P	G	D	I	.	E	G	W	I	M	L	G	R	V	G	M	A	L	G	N	A	S	I	A	T	D	A	Y	A	T	A	Y	R	L	.	.	D	P	K	N	S	D	A	A	L	G	Y	A	E	A	L	T	R	S	S	D	P	N	D	N
Query Conservation																	.	.	.	.						.																														.	.
Alig confidence																	.	.	.	.						.																														.	.
Template Conservation
Template Sequence		K	I	E	R	I	I	A	R	L	Q	R	R	I	A	E	G	Q	P	E	E	Q	Y	E	A	A	Q	E	T	R	L	V	A	A	R	Y	S	K	Q	G	N	W	A	A	A	V	D	I	L	A	S	V	S	Q	T	L	L	R	S	G	Q	G	G	S	G	G	D	L	A	V	L	L	V	D	T	F	R	Q	A	G	Q
Template Known Secondary structure																																							T	T																			T	T																				T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
																														276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	G	G	E	L	L	R	Q	L	V	R	T	D	H	S	N	I	R	V	L	S	M	Y	A	F	N	A	F	E	Q	Q	R	F	G	E	A	V	A	A	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	D	G	A	S	R	G	K	L	L	G	C	L	R	L	F	Q	P	G	E	P	V	R	K	R	F	V	K	E	M	I	D	W	S	K	K	F	G	D	Y	P	A	G	D	P	E	L	H	H	V	V	G	T	L	Y	V	E	E	G	E	F	E	A	A	E	K	H	L
Template Known Secondary structure																T	T	S		T	T																			S	S		T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions