Job Description P0ABM9 Confidence 66.92% Date Thu Jan 5 11:15:51 GMT 2012 Rank 126 Aligned Residues 107 % Identity 18% Template c3kaeC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:possible protein of nuclear scaffold; PDBTitle: cdc27 n-terminus Resolution 2.30 Å

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		218	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.
Predicted Secondary structure													.																																																														.	.	.	.
Query SS confidence													.																																																														.	.	.	.
Query Sequence		N	P	G	D	I	E	G	W	I	M	L	.	G	R	V	G	M	A	L	G	N	A	S	I	A	T	D	A	Y	A	T	A	Y	R	L	D	P	K	N	S	D	A	A	L	G	Y	A	E	A	L	T	R	S	S	D	P	N	D	N	R	L	G	G	E	L	L	R	Q	L	V	R	T	D	.	.	.	.	H	S	N
Query Conservation													.																																																														.	.	.	.
Alig confidence													.																																																		.												.	.	.	.
Template Conservation																																																															.
Template Sequence		D	P	G	D	E	E	F	F	E	S	L	L	G	D	L	C	T	L	S	G	Y	R	E	E	G	I	G	H	Y	V	R	S	F	G	K	S	F	L	F	S	P	V	E	N	L	L	L	E	N	K	V	P	Q	K	R	D	R	R	G	I	E	.	E	E	Y	V	S	D	S	I	E	F	H	E	S	L	S	P	S	L
Template Known Secondary structure			T	T																T	T																												T	T										S			.
Template Predicted Secondary structure																																																															.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		293	.													.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	.	.	.	.	.	.	.	.	.	.	.	.	V	L	S	M	Y	A	F	N	A	F	E	Q	Q	R	F	G	E	A	V	A	A	W	E	M	M	L	K	L	L	P	A
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	K	Y	M	E	H	V	P	G	I	G	S	Y	F	I	S	N	A	A	R	R	Y	F	N	L	G	M	N	D	K	S	K	A	C	F	E	L	V	R	R	K	D	P	M
Template Known Secondary structure							T	T	T	T	T																T	T																S	T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions