Job Description P0ABM9 Confidence 49.03% Date Thu Jan 5 11:15:51 GMT 2012 Rank 131 Aligned Residues 114 % Identity 11% Template c2wpvG_ PDB info PDB header:protein binding Chain: G: PDB Molecule:upf0363 protein yor164c; PDBTitle: crystal structure of s. cerevisiae get4-get5 complex Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.
Predicted Secondary structure																	.						.																														.	.																			.	.	.
Query SS confidence																	.						.																														.	.																			.	.	.
Query Sequence		E	M	S	R	L	A	L	G	M	R	T	Q	L	Q	K	.	N	P	G	D	I	.	E	G	W	I	M	L	G	R	V	G	M	A	L	G	N	A	S	I	A	T	D	A	Y	A	T	A	Y	R	L	.	.	D	P	K	N	S	D	A	A	L	G	Y	A	E	A	L	T	R	S	.	.	.	S	D	P	N	D	N
Query Conservation																	.						.																														.	.																			.	.	.
Alig confidence																	.						.																														.	.																			.	.	.
Template Conservation
Template Sequence		K	L	A	K	T	L	Q	R	F	E	N	K	I	K	A	G	D	Y	Y	E	A	H	Q	T	L	R	T	I	A	N	R	Y	V	R	S	K	S	Y	E	H	A	I	E	L	I	S	Q	G	A	L	S	F	L	K	A	K	Q	G	G	S	G	T	D	L	I	F	Y	L	L	E	V	Y	D	L	A	E	V	K	V	D
Template Known Secondary structure																T	T																			T	T																			T	T																			T	T				S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.																										.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	G	G	E	L	L	R	Q	L	V	R	T	D	H	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	V	L	S	M	Y	A	F	N	A	F	E	Q	Q	R	F	G	E	A	V	A	A	W
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	S	V	A	R	L	V	R	L	I	A	E	L	D	P	S	E	P	N	L	K	D	V	I	T	G	M	N	N	W	S	I	K	F	S	E	Y	K	F	G	D	P	Y	L	H	N	T	I	G	S	K	L	L	E	G	D	F	V	Y	E	A	E	R	Y	F
Template Known Secondary structure															S		T	T		T	T															T	S	S		T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions