Job Description P0ABM9 Confidence 99.68% Date Thu Jan 5 11:15:51 GMT 2012 Rank 34 Aligned Residues 205 % Identity 15% Template c2gw1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:mitochondrial precursor proteins import receptor; PDBTitle: crystal structure of the yeast tom70 Resolution 3.00 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	E	G	K	R	A	G	Y	V	V	Y	L	P	G	I	V	V	A	L	I	V	A	G	V	S	Y	Y	Q	T	G	N	Y	Q	Q	V	K	I	W	Q	Q	A	T	A	Q	A	P	A	L	L	D	R	A	L	D	P	K	A	D	P	L	N	E	E	E	M	S	R	L	A	L	G	M	R	T	Q	L	Q	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Y	N	Y	F	D	K	A	L	K	L	D	S	N	N	S	S	V	Y	Y	H	R	G	Q	M	N	F	I	L	Q	N	Y	D	Q	A	G	K	D	F	D	K	A	K	E	L	D	P	E	N	I	F	P	Y	I	Q	L	A	C	L	A	Y	R	E	N	K	F	D	D	C	E	T	L	F	S	E	A	K	R	K	F
Template Known Secondary structure		G	G	G							T	T		T	T		T													T	T		T	T												T		S	S		S										T	T	T	T	T																S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		P	G	D	I	E	G	W	I	M	L	G	R	V	G	M	A	L	G	N	A	S	I	A	T	D	A	Y	A	T	A	Y	R	L	D	P	K	.	.	.	.	.	.	N	S	D	A	A	L	G	Y	A	E	A	L	T	R	S	S	D	P	N	D	N	R	L	G	G	E	L	L	R	Q	L	V	R	T	D	H	S	N
Query Conservation																																						.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	A	P	E	V	P	N	F	F	A	E	I	L	T	D	K	N	D	F	D	K	A	L	K	Q	Y	D	L	A	I	E	L	E	N	K	L	D	G	I	Y	V	G	I	A	P	L	V	G	K	A	T	L	L	T	R	N	P	T	V	E	N	F	I	E	A	T	N	L	L	E	K	A	S	K	L	D	P	R	S
Template Known Secondary structure		T	T		S													T	T																		T	S	S	S		S	S		S												T	S			T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	V	L	S	M	Y	A	F	N	A	F	E	Q	Q	R	F	G	E	A	V	A	A	W	E	M	M	L	K	L	L	P	A	N	D	T	R	R	A	V	I	E	R	S	I	A	Q	A	M	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	A	K	I	G	L	A	Q	M	K	L	Q	Q	E	D	I	D	E	A	I	T	L	F	E	E	S	A	D	L	A	R	T	M	E	E	K	L	Q	A	I	T	F	A	E	A	A	K	V	Q	Q
Template Known Secondary structure															T	T																	S	S
Template Predicted Secondary structure
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions