Job Description P0ABM9 Confidence 29.78% Date Thu Jan 5 11:15:51 GMT 2012 Rank 139 Aligned Residues 67 % Identity 7% Template c2dl1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:spartin; PDBTitle: solution structure of the mit domain from human spartin Resolution UNK

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.												.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	R	L	G	G	E	L	L	R	Q	L	V	R	T	D	H	S	N	I	R	V	L	S	M	Y	A	F	N	A	F	E	Q	Q	R	F	G	E	A	V	A	A	W	E	M	M	L	K	L	L	P	A	N	D	T	.	.	.	.	.	.	.	.	.	.	.	R	R	A	V	I	E	R	S	I	A	Q	A	M	Q	H
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		Y	K	K	A	F	L	F	V	N	K	G	L	N	T	D	E	.	.	.	.	.	.	.	.	L	G	Q	K	E	E	A	K	N	Y	Y	K	Q	G	I	G	H	L	L	R	G	I	S	I	S	S	K	E	S	E	H	T	G	P	G	W	E	S	A	R	Q	M	Q	Q	K	M	K	E	T	L	Q	N	V	R	T	R
Template Known Secondary structure																		.	.	.	.	.	.	.	.		T																					S	S					T	T				S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		344	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	P	Q	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	I	L	E	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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