Job Description P0ABM9 Confidence 25.50% Date Thu Jan 5 11:15:51 GMT 2012 Rank 142 Aligned Residues 134 % Identity 9% Template c1b89A_ PDB info PDB header:clathrin Chain: A: PDB Molecule:protein (clathrin heavy chain); PDBTitle: clathrin heavy chain proximal leg segment (bovine) Resolution 2.60 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	Q	T	G	N	Y	Q	Q	V	K	I	W	Q	Q	A	T	A	Q	A	P	A	L	L	D	R	A	L	D	P	K	A	D	P	L	N	E	E	E	M	S	R	L	A	L	G	M	R	T	Q	L	Q	K	N	P	G	D	I	E	G	W	I	M	L	G	R	V	G	M	A	L	G	N	A	S	I	A	T	D	A
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		F	I	N	G	P	M	Y	D	A	A	K	L	L	Y	N	N	V	S	N	F	G	R	L	A	S	T	L	V	H	L	G	.	.	.	.	.	.	.	E	Y	Q	A	A	V	D	G	A	R	K	A	.	.	.	.	.	N	S	T	R	T	W	K	E	V	C	F	A	C	V	D	G	K	E	F	R	L	A	Q	X	C
Template Known Secondary structure		T	T	T				T	T	T								T	T											T	T	T	.	.	.	.	.	.	.													.	.	.	.	.	T															T	T								T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		1189	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.								1220	.	.	.	.	.	.	.	.	.	1230	.						.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	T	A	Y	R	L	D	P	K	N	S	D	A	A	L	G	Y	A	E	A	L	T	R	S	S	D	P	N	D	N	R	L	G	G	E	L	L	R	Q	L	V	R	T	D	H	S	N	I	R	V	L	S	M	Y	A	F	N	A	F	E	Q	Q	R	F	G	E	A	V	A	A	W	E	M
Query Conservation
Alig confidence							.	.	.	.																		.	.	.																													.
Template Conservation							.	.	.	.																		.	.	.																													.
Template Sequence		G	L	H	I	V	.	.	.	.	V	H	A	D	E	L	E	E	L	I	N	Y	Y	Q	D	R	G	.	.	.	Y	F	E	E	L	I	T	X	L	E	A	A	L	G	L	E	R	A	H	X	G	X	F	T	E	L	A	I	.	L	Y	S	K	F	K	P	Q	K	X	R	E	H	L	E	L
Template Known Secondary structure		T	T	T	T	T	.	.	.	.	T															T	T	.	.	.													T	T	S	T	T												.				T	T
Template Predicted Secondary structure							.	.	.	.																		.	.	.																													.
Template SS confidence
		1273	.	.	.	.					.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.				.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.		.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions