Job Description P0ACV6 Confidence 14.74% Date Thu Jan 5 11:19:10 GMT 2012 Rank 56 Aligned Residues 98 % Identity 13% Template c3ne8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase; PDBTitle: the crystal structure of a domain from n-acetylmuramoyl-l-alanine2 amidase of bartonella henselae str. houston-1 Resolution 1.24 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query Sequence		Q	A	L	C	Q	L	I	H	R	I	Q	P	A	W	V	V	S	F	H	D	P	L	A	.	.	.	.	.	.	.	.	.	.	C	I	E	D	P	R	H	S	E	L	G	E	W	L	A	Q	A	F	E	L	P	L	V	T	S	V	G	Y	E	T	P	G	S	F	G	S	W	C	A	D	L	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	R	V	K	K	A	Q	E	F	D	A	D	L	F	I	S	I	H	A	D	T	I	D	V	H	S	L	R	G	A	T	V	Y	T	I	S	D	E	A	S	D	A	I	A	K	S	L	A	E	S	E	N	K	V	D	L	L	D	G	L	P	K	E	D	I	L	L	D	L	T	R	R	E	T	H	A	F	S	I
Template Known Secondary structure											T	T		S											S		T	T			S								S	S		S	S												G	G	G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
																																			203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.														.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	H	C	I	T	A	E	F	P	P	I	S	S	D	E	A	S	E	K	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	M	A	N	L	L	R	W	H	P	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	F	A	N	N	V	V	S	N	L	S	K	S	H	I	N	L	I	N	N	P	H	R	Y	A	D	F	Q	V	L	K	A	P	D	V	P	S	V	L	I	E	I	G	Y	L	S	N	K	E	D	E	K	L	L	N	N	P	Q	W	R	K	Q	X	A	A	S	I	A	Y	S	I	R	Q	F	A	E	Y	R	Q	K
Template Known Secondary structure														T	T														G	G	G			S	S	S							S			T	T	S								T																								T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions