Job Description P0ACV6 Confidence 100.00% Date Thu Jan 5 11:19:10 GMT 2012 Rank 9 Aligned Residues 188 % Identity 29% Template c3mn8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:lp15968p; PDBTitle: structure of drosophila melanogaster carboxypeptidase d isoform 1b2 short Resolution 2.70 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.													.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	H	Y	G	R	S	L	L	G	A	P	L	I	W	F	P	A	P	A	A	.	.	.	.	.	.	S	R	E	S	G	L	I	L	A	G	T	H	G	D	E	N	S	S	V	V	T	L	S	C	A	L	R	T	L	T	P	S	L	R	R	.	.	.	.	.	.	.	.	.	.	.	.	H	H	V	V	L	C
Query Conservation																							.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	H	F	L	G	R	S	L	E	G	R	N	L	L	A	L	Q	I	S	R	N	T	R	S	R	N	L	L	T	P	P	V	K	Y	I	A	N	M	H	G	D	E	T	V	G	R	Q	L	L	V	Y	M	A	Q	Y	L	L	G	N	H	E	R	I	S	D	L	G	Q	L	V	N	S	T	D	I	Y	L	V	P	T
Template Known Secondary structure									T	T	S										S		T	T	S			T	T										S	S	T	T																			T	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		79	80	.	.	.	.	.	.	.	.													.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	P	D	G	C	Q	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	R	A	N	A	N	G	V	D	L	N	R	N	F	P	A	A	N	W	K	E	G	E	T	V	Y	R	W	N	S	A	A	E	E	R	D	V	V	L	L	T	G	D	K	P	G	S	E	P	E	T	Q	A	L	C	Q	L	I	H
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	P	D	G	Y	A	L	S	Q	E	G	N	C	E	S	L	P	N	Y	V	G	R	G	N	A	A	N	I	D	L	N	R	D	F	P	D	R	L	E	A	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	P	E	T	A	A	L	V	N	W	I	V
Template Known Secondary structure		S							T	S		T	T		S	S			G	G	G	T	T	T	S		T	T				G	G	G		S			T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																									.	.	.	.	190	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																			.	190	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	Q	P	A	W	V	V	S	F	H	D	P	L	A	C	I	E	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	S	E	L	G	E	W	L	A	Q	A	F	E	L	P	L	V	T	S	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	T	P
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	P	F	V	L	S	A	N	F	H	G	G	A	V	V	A	S	Y	P	Y	D	N	S	L	A	H	N	E	C	C	E	E	S	L	T	P	D	D	R	V	F	K	Q	L	A	H	T	Y	S	D	N	H	P	I	M	R	K	G	N	N	C	N	D	S	F	S	G	G	I	T	N	G	A	H	W	Y	E	L	S
Template Known Secondary structure		T	S											S	S						S		S			S	S			S	B	S						T	T														T	S	T	T	T	T	T	S		G	G	G				G	G	G								B			S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		193	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	S	F	G	S	W	C	A	.	D	L	N	L	H	C	I	T	A	E	F	P	P	I	S	S	D	E	A	S	E	K	Y	L	F	A	M	A	N
Query Conservation										.
Alig confidence										.													.
Template Conservation																							.
Template Sequence		G	G	M	Q	D	F	N	Y	A	F	S	N	C	F	E	L	T	I	E	L	S	.	C	C	K	Y	P	A	A	S	T	L	P	Q	E	W	Q	R
Template Known Secondary structure		S										S	S										.	S	S	S	S			G	G	G
Template Predicted Secondary structure																							.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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