Job Description P0ACV6 Confidence 100.00% Date Thu Jan 5 11:19:10 GMT 2012 Rank 23 Aligned Residues 175 % Identity 23% Template c3l2nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase m14, carboxypeptidase a; PDBTitle: crystal structure of putative carboxypeptidase a (yp_562911.1) from2 shewanella denitrificans os-217 at 2.39 a resolution Resolution 2.39 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																							.	.																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	H	Y	G	R	S	L	L	G	A	P	L	I	W	F	P	A	P	A	A	.	.	S	R	E	S	G	L	I	L	A	G	T	H	G	D	E	N	S	S	V	V	T	L	S	C	A	L	R	T	L	T	P	S	L	R	.	.	.	.	.	.	.	.	.	.	R	H	H	V	V	L	C	V	N	P	D	G	C
Query Conservation																							.	.																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	H	L	G	L	T	L	D	G	R	D	X	T	L	V	K	V	G	D	D	D	P	S	K	K	S	I	W	I	T	A	R	Q	H	P	G	E	T	X	A	E	W	L	V	E	G	L	L	N	Q	L	L	D	N	D	C	P	T	S	K	A	L	L	D	K	A	N	F	Y	I	V	P	N	X	N	P	D	G	S
Template Known Secondary structure									T	T	S									S				T	T	S									S	S	T	T		T														T		T	T	S																S		S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		85	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		Q	L	G	.	L	R	A	N	A	N	G	V	D	L	N	R	N	F	P	A	A	N	W	K	E	G	E	T	V	Y	R	W	N	S	A	A	E	E	R	D	V	V	L	L	T	G	D	K	P	G	S	E	P	E	T	Q	A	L	C	Q	L	I	H	R	I	Q	P	A	W	V	V	S	F	H	D	P	L	A	C	I
Query Conservation					.
Alig confidence					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	G	H	L	R	T	N	A	V	G	A	N	L	N	R	E	W	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	L	E	R	S	P	E	V	Y	Y	V	V	N	K	X	H	E	T	G	V	D	L	F	Y	D	V	H	G	D	E	G	L	P
Template Known Secondary structure			T	T		S	S			T	T	S			G	G	G		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T																	S									S	S		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.																											.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		164	.	.													.	.	.	170	.	.	.	.	.	.	.												.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	P	.	.	.	.	.	.	.	.	.	.	.	.	R	H	S	E	L	G	E	W	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	A	F	E	L	P	L	V	T	S	V	G	Y	E	T	P	G	S	F	G	S	W	C	A	D	L	N	L	H	C	I	T	A	E	F	P	P	I	S	S	D
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	F	L	A	G	C	E	G	I	P	N	Y	S	D	K	L	A	S	L	Q	Q	D	F	V	A	A	L	S	L	A	S	A	D	F	Q	T	E	F	G	Y	D	K	D	E	P	G	K	A	N	L	T	V	A	C	N	W	V	A	N	T	F	K	C	L	S	N	T	L	E	X	P	F	K	D	N	A
Template Known Secondary structure		S	B						T	T	S	T	T																					T	T	B		S	S	S	S						T	T				T	T	S										T										S	S			G
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions