Job Description P0ACV6 Confidence 100.00% Date Thu Jan 5 11:19:10 GMT 2012 Rank 1 Aligned Residues 210 % Identity 26% Template c3dgvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:carboxypeptidase b2; PDBTitle: crystal structure of thrombin activatable fibrinolysis inhibitor2 (tafi) Resolution 2.50 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.													.	.	.	.	.	.	.	80	.
Predicted Secondary structure																								.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	H	Y	G	R	S	L	L	G	A	P	L	I	W	F	P	A	P	A	A	S	.	.	.	R	E	S	G	L	I	L	A	G	T	H	G	D	E	N	S	S	V	V	T	L	S	C	A	L	R	T	L	T	P	S	L	R	R	.	.	.	.	.	.	.	.	.	.	.	.	H	H	V	V	L	C	V	N	P
Query Conservation																								.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	H	I	G	S	S	Y	E	K	Y	P	L	Y	V	L	K	V	S	K	K	E	Q	R	A	K	N	A	M	W	I	D	C	G	I	H	A	R	E	W	I	S	P	A	F	C	L	W	F	V	G	S	V	T	Y	Y	Y	G	K	E	K	M	H	T	N	L	L	K	H	M	D	F	Y	I	M	P	V	V	N	V
Template Known Secondary structure									T	T														S	S											S	S	T	T		T																	T	T	T																	S		S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		82	.	.	.	.	.	.															.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	C	Q	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	N	A	N	G	V	D	L	N	R	N	F	P	A	A	N	W	K	E	G	E	T	V	Y	R	W	N	S	A	A	E	E	R	D	V	V	L	L	T	G	D	K	P	G	S	E	P	E	T	Q	A	L	C	Q	L	I	H	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		D	G	Y	D	Y	T	W	K	K	D	R	M	W	R	K	N	R	S	L	H	E	K	N	A	C	V	G	T	D	L	N	R	N	F	A	S	K	H	W	.	.	.	.	.	.	.	C	G	E	G	A	S	S	S	S	C	S	E	I	Y	C	G	T	Y	P	E	S	E	P	E	V	K	A	V	A	D	F	L	R	R
Template Known Secondary structure										T		T	T			S						T	T		S	S					G	G	G		S			T	T	T	.	.	.	.	.	.	.	T		T	T	S	B	S	S	T	T	S	T	T	B			S	S	T	T		S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.								.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		148	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.													.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure							.	.																	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	P	A	W	.	.	V	V	S	F	H	D	P	L	A	C	I	E	D	P	R	H	.	.	.	.	.	.	.	.	.	.	.	.	S	E	L	G	E	W	L	A	Q	A	F	E	L	P	L	.	.	.	.	.	.	.	.	.	V	T	S	V	G	Y	E	T	P	G	S	F	G	S	W	C	A	D	L	N	L
Query Conservation							.	.																	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence							.	.																	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	K	H	I	K	A	Y	I	S	M	H	S	Y	S	Q	K	I	V	F	P	Y	S	Y	S	R	S	R	S	K	D	H	E	E	L	S	L	V	A	R	E	A	V	F	A	M	E	N	I	H	R	N	I	R	Y	T	H	G	S	G	S	E	S	L	Y	L	A	P	G	G	S	D	D	W	I	Y	D	L	G	I
Template Known Secondary structure		T	G	G	G										S	S	S					S		S	S		S	S			T	T																				T	T								G	G	G	S	S	S			T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		205		.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure			.							.	.	.	.	.	.	.	.	.	.
Query SS confidence			.							.	.	.	.	.	.	.	.	.	.
Query Sequence		H	.	C	I	T	A	E	F	.	.	.	.	.	.	.	.	.	.	P	P	I	S	S	D	E	A	S	E	K	Y	L	F	A	M	A	N	L	L	R	W
Query Conservation			.							.	.	.	.	.	.	.	.	.	.
Alig confidence			.							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	S	F	T	F	E	L	R	D	K	G	K	Y	G	F	L	L	P	E	S	Y	I	R	P	T	C	S	E	A	L	V	A	V	A	K	I	A	S	H
Template Known Secondary structure		S								S		S	S	S	S	T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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