Job Description P0ACV6 Confidence 100.00% Date Thu Jan 5 11:19:10 GMT 2012 Rank 5 Aligned Residues 209 % Identity 21% Template c1nsaA_ PDB info PDB header:serine protease Chain: A: PDB Molecule:procarboxypeptidase b; PDBTitle: three-dimensional structure of porcine procarboxypeptidase2 b: a structural basis of its inactivity Resolution 2.30 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.													.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	H	Y	G	R	S	L	L	G	A	P	L	I	W	F	P	A	P	A	A	S	.	.	R	E	S	G	L	I	L	A	G	T	H	G	D	E	N	S	S	V	V	T	L	S	C	A	L	R	T	L	T	P	S	L	R	R	.	.	.	.	.	.	.	.	.	.	.	.	H	H	V	V	L	C	V	N	P	D
Query Conservation																								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	A	I	G	T	T	F	D	G	D	N	I	Y	L	L	K	V	G	K	P	G	S	N	K	P	A	I	F	M	D	C	G	F	H	A	R	E	W	I	S	Q	A	F	C	Q	W	F	V	R	D	A	V	R	T	Y	G	Y	E	A	H	M	T	E	F	L	D	N	L	D	F	Y	V	L	P	V	L	N	I	D
Template Known Secondary structure									T	T	S									S				T	T										S	S	T	T																			T	T	T	S																S		S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		83	.	.	.	.	.															.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	Q	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	N	A	N	G	V	D	L	N	R	N	F	P	A	A	N	W	K	E	G	E	T	V	Y	R	W	N	S	A	A	E	E	R	D	V	V	L	L	T	G	D	K	P	G	S	E	P	E	T	Q	A	L	C	Q	L	I	H	R	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.
Template Sequence		G	Y	I	Y	T	W	T	K	N	R	M	W	R	K	T	R	S	T	N	A	G	S	S	C	T	G	T	D	P	N	R	N	F	N	A	G	W	.	.	.	.	.	.	.	.	C	T	V	G	A	S	V	N	P	C	N	E	T	Y	C	G	S	A	A	E	S	E	K	E	T	K	A	L	A	D	F	I	R	N	N
Template Known Secondary structure									T		T	T			S				B		T	T	S	S		B				G	G	G	S	S	S	S	S	T	.	.	.	.	.	.	.	.	T	S	S	S		B	S		T	T	S	T	T	B			S	S	T	T		S													T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
				149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Query SS confidence		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Query Sequence		.	.	Q	P	A	W	V	V	S	F	H	D	P	L	A	C	I	E	D	P	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	L	G	E	W	L	A	Q	A	F	E	L	P	L	V	T	S	V	G	Y	E	T	P	G	S	F	G	S	W	C	A	D	L	N	L	H	.
Query Conservation		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Alig confidence		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation
Template Sequence		L	S	S	I	K	A	Y	L	T	I	H	S	Y	S	Q	M	I	L	Y	P	Y	S	Y	D	Y	K	L	P	E	N	D	A	E	L	N	S	L	A	K	G	A	V	K	E	L	A	S	L	Y	G	T	S	Y	S	Y	G	P	G	S	T	T	I	Y	P	A	A	G	G	S	D	D	W	A	Y	N	Q	G	I	K	Y
Template Known Secondary structure		T	T	T										S	S						S		S	S		S				T	T																																S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		206	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.
Query Sequence		C	I	T	A	E	F	.	.	.	.	.	.	.	.	.	.	P	P	I	S	S	D	E	A	S	E	K	Y	L	F	A	M	A	N	L	L	R	W
Query Conservation								.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	T	F	E	L	R	D	K	G	R	F	G	F	V	L	P	E	S	Q	I	Q	A	T	C	Q	E	T	M	L	A	V	K	Y	V	T	N	Y
Template Known Secondary structure								S		S	S	S	S	T	T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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