Job Description P0ACV6 Confidence 100.00% Date Thu Jan 5 11:19:10 GMT 2012 Rank 6 Aligned Residues 207 % Identity 23% Template c1jqgA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase a; PDBTitle: crystal structure of the carboxypeptidase a from2 helicoverpa armigera Resolution 2.50 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70									.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																								.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query Sequence		T	E	H	Y	G	R	S	L	L	G	A	P	L	I	W	F	P	A	P	A	A	S	.	.	.	.	.	R	E	S	G	L	I	L	A	G	T	H	G	D	E	N	S	S	V	V	T	L	S	C	A	L	R	T	L	T	P	S	L	.	.	.	.	.	.	.	.	R	R	H	H	V	V	L	C	V	N	P	D	G
Query Conservation																								.	.	.	.	.																																	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	E	G	G	K	S	F	E	G	R	S	I	K	Y	L	R	I	S	T	T	N	F	Q	D	A	S	K	P	V	V	M	M	Q	S	L	L	H	C	R	E	W	V	T	L	P	A	T	L	Y	A	I	H	K	L	V	I	D	V	T	E	S	D	L	I	N	N	I	D	W	I	I	L	P	V	A	N	P	D	G
Template Known Secondary structure									T	T											T	T	T	T			T	T	S									S	S	T	T		T	T														T	S				T					S							S		S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		84	.	.	.																	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	A	N	A	N	G	V	D	L	N	R	N	F	P	A	A	N	W	K	E	G	E	T	V	Y	R	W	N	S	A	A	E	E	R	D	V	V	L	L	T	G	D	K	P	G	S	E	P	E	T	Q	A	L	C	Q	L	I	H	R
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	H	T	F	G	G	D	R	Y	W	R	K	N	R	A	T	G	Y	M	A	G	N	L	C	M	G	V	D	L	N	R	N	F	G	M	N	W	.	.	.	.	.	.	.	.	.	G	T	A	S	S	S	S	V	C	S	D	T	F	H	G	R	S	A	F	S	E	P	E	S	S	V	I	R	D	I	I	A	E
Template Known Secondary structure							S	S		T	T			S					S	S	S	G	G	G	S	S					G	G	G		S	S	T	T	T	.	.	.	.	.	.	.	.	.	T	S	S	S	B			T	T	S	T	T	B			S	S	T	T		S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.										.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		148			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.												.	170	.	.	.	.	.	.	.	.												.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure			.	.																					.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.																					.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	.	.	Q	P	A	W	V	V	S	F	H	D	P	L	A	C	I	E	D	P	R	H	.	.	.	.	.	.	.	.	.	.	.	S	E	L	G	E	W	L	A	Q	A	.	.	.	.	.	.	.	.	.	.	.	F	E	L	P	L	V	T	S	V	G	Y	E	T	P	G	S	F	G	S	W	C	A	D	L	N
Query Conservation			.	.																					.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																					.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	R	N	R	M	A	L	Y	L	D	I	H	S	F	G	S	M	I	L	Y	G	Y	G	N	G	V	L	P	S	N	A	L	Q	L	H	L	I	G	V	Q	M	A	Q	A	I	D	R	V	K	W	S	S	N	K	D	Y	I	V	G	N	I	F	H	V	L	Y	A	A	S	G	G	A	S	D	Y	A	M	Q	A	A
Template Known Secondary structure		T	T	T	T										S	S	S					S		T	T	S				T	T																	T	T			T	T	S												S					S										T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		204	.		.	.	.	.	210	.															.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	.	C	I	T	A	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	I	S	S	D	E	A	S	E	K	Y	L	F	A	M	A	N	L	L	R
Query Conservation				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	F	S	Y	T	Y	E	L	P	A	Y	R	N	S	V	W	F	D	G	F	L	V	D	P	D	F	I	E	Q	A	G	F	E	T	W	E	G	I	K	V	G	A	R
Template Known Secondary structure			S													S	S			S	S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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