Job Description P0ACV6 Confidence 99.95% Date Thu Jan 5 11:19:10 GMT 2012 Rank 24 Aligned Residues 160 % Identity 18% Template c1cpbB_ PDB info PDB header:hydrolase (c-terminal peptidase) Chain: B: PDB Molecule:carboxypeptidase b; PDBTitle: structure of carboxypeptidase b at 2.8 angstroms resolution Resolution 2.80 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.															.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	T	L	T	P	S	L	R	R	H	H	V	V	L	C	V	N	P	D	G	C	Q	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	N	A	N	G	V	D	L	N	R	N	F	P	A	A	N	W	K	E	G	E	T	V	Y	R	W	N	S	A	A	E	E	R	D	V	V	L	L	T
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation									.																																																			.	.	.	.	.	.	.	.
Template Sequence		M	T	E	F	L	D	K	.	L	D	F	Y	V	L	P	V	V	N	I	D	G	Y	I	Y	T	W	T	T	N	R	M	W	R	K	T	R	S	T	R	A	G	S	S	C	T	G	T	D	L	N	R	N	F	D	A	G	W	C	.	.	.	.	.	.	.	.	S	I	G	A	S	N	N	P	C	S	E	T	Y	C
Template Known Secondary structure		T					T	T	.	S			B			S		S	S								T	T	S		T	T			S						S	S		S										S	S	S	S	T	T	.	.	.	.	.	.	.	.	S	T	T	S	B	S		T	T		S	S	B
Template Predicted Secondary structure									.																																																			.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																						.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	K	P	G	S	E	P	E	T	Q	A	L	C	Q	L	I	H	R	I	.	Q	P	A	W	V	V	S	F	H	D	P	L	A	C	I	E	D	P	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	L	G	E	W	L	A	Q	A	F	E	L	P	L	V	T	S	V
Query Conservation																						.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	A	A	E	S	E	K	E	S	K	A	V	A	D	F	I	R	N	H	L	S	I	K	A	Y	L	T	I	H	S	Y	S	Q	M	M	L	Y	P	Y	S	Y	D	Y	K	L	P	K	N	N	V	E	L	N	T	L	A	K	G	A	V	K	K	L	A	S	L	H	G	T	T	Y	S	Y	G	P	G	A	T	T
Template Known Secondary structure			S	S	T	T															T	G	G	G									S	S			B			S		S	T	T	S				S	S		S	S	S	S			S	S	S	S	S	S	S	S	S	S	S	S						B	S		S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																	.											.	.	.
Query SS confidence																	.											.	.	.
Query Sequence		G	Y	E	T	P	G	S	F	G	S	W	C	A	D	L	.	N	L	H	C	I	T	A	E	F	P	.	.	.	P	I	S	S	D	E	A	S	E	K	Y	L	F	A	M	A	N	L	L
Query Conservation																	.											.	.	.
Alig confidence																	.											.	.	.
Template Conservation
Template Sequence		I	Y	P	A	S	G	G	S	D	D	W	A	Y	D	Q	G	I	K	Y	S	F	T	F	E	L	R	D	K	G	R	Y	G	F	V	L	P	E	S	Q	I	Q	P	T	C	E	E	T	M
Template Known Secondary structure							S		S							T	T	T	S	T	T								T	T	S	S	S	S				S	G	G	G						T	T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions