Job Description P0ACV6 Confidence 100.00% Date Thu Jan 5 11:19:10 GMT 2012 Rank 3 Aligned Residues 209 % Identity 18% Template c1ayeA_ PDB info PDB header:serine protease Chain: A: PDB Molecule:procarboxypeptidase a2; PDBTitle: human procarboxypeptidase a2 Resolution 1.80 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.													.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																					.																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	H	Y	G	R	S	L	L	G	A	P	L	I	W	F	P	A	P	.	A	A	S	R	E	S	G	L	I	L	A	G	T	H	G	D	E	N	S	S	V	V	T	L	S	C	A	L	R	T	L	T	P	S	L	R	R	.	.	.	.	.	.	.	.	.	.	.	.	H	H	V	V	L	C	V	N	P	D	G
Query Conservation																					.																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	N	I	G	S	S	F	E	N	R	P	M	N	V	L	K	F	S	T	G	G	D	K	P	A	I	W	L	D	A	G	I	H	A	R	E	W	V	T	Q	A	T	A	L	W	T	A	N	K	I	V	S	D	Y	G	K	D	P	S	I	T	S	I	L	D	A	L	D	I	F	L	L	P	V	T	N	P	D	G
Template Known Secondary structure									T	T	S										S	S	S	S										S	S	T	T																			T	T	T	S																S		S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		84	.	.	.	.															.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	Q	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	N	A	N	G	V	D	L	N	R	N	F	P	A	A	N	W	K	E	G	E	T	V	Y	R	W	N	S	A	A	E	E	R	D	V	V	L	L	T	G	D	K	P	G	S	E	P	E	T	Q	A	L	C	Q	L	I	H	R	I	Q
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		Y	V	F	S	Q	T	K	N	R	M	W	R	K	T	R	S	K	V	S	G	S	L	C	V	G	V	D	P	N	R	N	W	D	A	G	F	.	.	.	.	.	.	.	.	G	G	P	G	A	S	S	N	P	C	S	D	S	Y	H	G	P	S	A	N	S	E	V	E	V	K	S	I	V	D	F	I	K	S	H	G
Template Known Secondary structure								T		T	T			S				B		T	T		S		B				G	G	G		S	S	S	S	T	.	.	.	.	.	.	.	.	T	S	S	S	S	B			T	T	S	T	T	B			S	S	T	T		S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.
Predicted Secondary structure			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Query SS confidence			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Query Sequence		P	.	A	W	V	V	S	F	H	D	P	L	A	C	I	E	D	P	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	L	G	E	W	L	A	Q	A	F	E	L	P	L	V	T	S	V	G	Y	E	T	P	G	S	F	G	S	W	C	A	D	L	N	L	H	.	C	I
Query Conservation			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Alig confidence			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation
Template Sequence		K	V	K	A	F	I	I	L	H	S	Y	S	Q	L	L	M	F	P	Y	G	Y	K	C	T	K	L	D	D	F	D	E	L	S	E	V	A	Q	K	A	A	Q	S	L	R	S	L	H	G	T	K	Y	K	V	G	P	I	C	S	V	I	Y	Q	A	S	G	G	S	I	D	W	S	Y	D	Y	G	I	K	Y	S	F
Template Known Secondary structure												S	S						S		S	S	S		S			T	T																																T				S	S									T	T		S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		208	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	E	.	.	.	.	.	.	.	.	.	.	F	P	P	I	S	S	D	E	A	S	E	K	Y	L	F	A	M	A	N	L	L	R	W
Query Conservation					.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	E	L	R	D	T	G	R	Y	G	F	L	L	P	A	R	Q	I	L	P	T	A	E	E	T	W	L	G	L	K	A	I	M	E	H
Template Known Secondary structure						S		S	S	S	S	T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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