Job Description P0AG27 Confidence 99.83% Date Thu Jan 5 11:27:57 GMT 2012 Rank 34 Aligned Residues 92 % Identity 22% Template c2k0zA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein hp1203; PDBTitle: solution nmr structure of protein hp1203 from helicobacter pylori2 26695. northeast structural genomics consortium (nesg) target3 pt1/ontario center for structural proteomics target hp1203 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	K	E	D	A	V	V	V	D	L	R	Q	R	D	D	F	R	K	G	H	I	A	G	S	I	N	L	L	P	S	E	I	K	A	N	N	V	G	E	L	E	K	H	K	D	K	P	V	I	V	V	D	G	S	G	M	Q	C	Q	E	P	A	N	A	L	T	K	A	G	F	A	Q	V	F	V	L	K	E	G
Query Conservation
Alig confidence																																									.																																			.
Template Conservation																																									.																																			.
Template Sequence		V	N	F	N	D	F	I	V	V	D	V	R	E	L	D	E	Y	E	E	L	H	L	P	N	A	T	L	I	S	V	N	D	Q	E	K	L	A	D	F	.	L	S	Q	H	K	D	K	K	V	L	L	H	C	R	A	G	R	R	A	L	D	A	A	K	S	M	H	E	L	G	Y	T	P	Y	.	Y	L	E	G	N
Template Known Secondary structure				G	G	G	S														S	B		T	T						T	T									.			S		S	S	S							S	S	S													T	T					.				S
Template Predicted Secondary structure																																									.																																			.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	W	A	G	E	N	L	P	L	V	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	D	F	E	K	Y	G	F	R	M	V	Y	D
Template Known Secondary structure		G	G	G	T	T	T	T	T				B
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions