Job Description P27129 Confidence 11.35% Date Thu Jan 5 11:43:17 GMT 2012 Rank 30 Aligned Residues 96 % Identity 15% Template d1xhba2 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain Resolution 2.50

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																									.																					.
Query SS confidence																									.																					.
Query Sequence		V	A	Y	G	V	D	A	N	Y	L	D	G	V	G	V	S	I	T	S	I	V	L	N	.	N	R	H	I	N	L	D	F	Y	I	I	A	D	V	Y	N	D	G	F	F	.	Q	K	I	A	K	L	A	E	Q	N	Q	L	R	I	T	L	Y	R	I	N	T	D	K	L	Q	C	L	P	C	T	Q	V	W	S	R
Query Conservation																									.																					.
Alig confidence																									.																					.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	I	V	F	H	N	E	A	W	S	T	L	L	R	T	V	H	S	V	I	N	R	S	P	R	H	M	I	E	E	I	V	L	V	D	D	A	S	E	R	D	F	L	K	R	P	L	E	S	Y	V	K	K	L	K	V	P	V	H	V	I	R	M	E	Q	R	.	.	.	.	.	.	.	.	.	.	.	S	G
Template Known Secondary structure							S	S																S	S		G	G	G										S				G	G	G	T									S	S	S	S								S	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.												.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	Y	F	R	L	F	A	F	Q	L	L	G	L	T	L	D	R	L	L	Y	L	D	A	D	V	V	C	K	G	D
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		L	I	R	A	R	L	K	G	A	A	V	S	.	.	R	G	Q	V	I	T	F	L	D	A	H	C	E	C	T	A	G
Template Known Secondary structure														.	.		S	S							S	S					T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions