Job Description P27129 Confidence 92.71% Date Thu Jan 5 11:43:17 GMT 2012 Rank 8 Aligned Residues 193 % Identity 15% Template d1o7qa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases alpha-1,3-galactosyltransferase-like Resolution 1.3

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																.													.
Query SS confidence																.													.
Query Sequence		C	L	N	V	A	Y	G	V	D	A	N	Y	L	D	.	G	V	G	V	S	I	T	S	I	V	L	N	.	N	R	H	I	N	L	D	F	Y	I	I	A	D	V	Y	N	D	G	F	F	Q	K	I	A	K	L	A	E	Q	N	Q	L	R	I	T	L	Y	R	I	N	T	D	K	L	Q	C	L	P	C	T	Q	V
Query Conservation																.													.
Alig confidence																.													.															.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		T	V	G	L	T	V	F	A	V	G	R	Y	I	E	H	Y	L	E	E	F	L	T	S	A	N	K	H	F	M	V	G	H	P	V	I	F	Y	I	M	V	D	D	.	.	.	.	.	V	S	R	M	P	L	I	E	L	G	P	L	R	S	F	K	V	F	K	I	K	P	E	.	.	.	.	.	.	.	.	K	R
Template Known Secondary structure											T	T																	B	S	T	T	S									S		.	.	.	.	.	G	G	G								T	T												.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																												.	.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.									.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																.	.	.	.	.																																																							.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.																																																							.	.	.	.	.	.	.
Query Sequence		W	S	R	A	M	Y	F	R	L	F	A	F	Q	L	.	.	.	.	.	L	G	L	T	L	D	R	L	L	Y	L	D	A	D	V	V	C	K	G	D	I	S	Q	L	L	H	L	G	L	N	G	A	V	A	A	V	V	K	D	V	E	P	M	Q	E	K	A	V	S	R	L	S	D	P	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.																																																							.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																					.	.	.	.																															.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		W	Q	D	I	S	M	M	R	M	K	T	I	G	E	H	I	V	A	H	I	Q	H	E	V	D	F	L	F	C	M	D	V	D	Q	V	F	Q	D	K	.	.	.	.	F	G	V	E	T	L	G	E	S	V	A	Q	L	Q	A	W	W	Y	K	A	D	P	N	D	F	T	Y	E	R	R	K	E	S	A	A	Y	I
Template Known Secondary structure																				T						S							S	S					S		.	.	.	.	B		G	G	G		S	S							T	T	T	T	T	S		G	G	G	S						T	T	S	T	T
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
				173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure		.	.																						.																																		.	.
Query SS confidence		.	.																						.																																		.	.
Query Sequence		.	.	E	L	L	G	Q	Y	F	N	S	G	V	V	Y	L	D	L	K	K	W	A	D	.	A	K	L	T	E	K	A	L	S	I	L	M	S	K	D	N	V	Y	K	Y	P	D	Q	D	V	M	N	V	L	L	K	G	M	.	.	T	L	F	L	P	R	E	Y	N	T
Query Conservation		.	.																						.																																		.	.
Alig confidence		.	.																						.																																		.	.
Template Conservation
Template Sequence		P	F	G	E	G	D	F	Y	Y	H	A	A	I	F	G	G	T	P	T	Q	V	L	N	I	T	Q	E	C	F	K	G	I	L	K	D	K	K	N	D	I	E	A	Q	W	H	D	E	S	H	L	N	K	Y	F	L	L	N	K	P	T	K	I	L	S	P	E	Y	C	W
Template Known Secondary structure			T	T			S																																T	T				T	T	T												S			S					G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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