Job Description P27129 Confidence 4.26% Date Thu Jan 5 11:43:17 GMT 2012 Rank 54 Aligned Residues 87 % Identity 11% Template d1ny1a_ SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase Resolution 1.80

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Y	G	V	D	A	N	Y	L	D	G	V	G	V	S	I	T	S	I	V	L	N	N	R	H	I	N	L	D	F	Y	I	I	A	D	V	Y	N	D	G	F	F	Q	K	I	A	K	L	A	E	Q	N	Q	L	R	I	T	L	Y	R	I	N	T	D	K	L	Q	C	L	P	C	T	Q	V	W	S	R	A	M
Query Conservation
Alig confidence																											.													.														.
Template Conservation																											.													.														.
Template Sequence		I	Y	L	T	F	D	N	G	Y	E	N	G	Y	T	P	K	V	L	D	V	L	K	K	H	R	.	V	T	G	T	F	F	V	T	G	H	F	V	.	K	D	Q	P	Q	L	I	K	R	X	S	D	E	.	G	H	I	I	G	N	H	S	F	H	H	P	D	L	T	T	K	T	A	D	Q	I	Q	D	E	L	D
Template Known Secondary structure									S	S			S												T	T	.													.													T	.	T								S	S				G	G	G	S
Template Predicted Secondary structure																											.													.														.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	R	L	F	A	F	Q	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	N	E	E	V	Y	K	I	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions