 |
Job Description | P27129 | Confidence | 10.11% | Date | Thu Jan 5 11:43:17 GMT 2012 |
Rank | 35 | Aligned Residues | 46 |
% Identity | 24% | Template | c3e20C_ |
PDB info |
PDB header:translation | Chain: C: PDB Molecule:eukaryotic peptide chain release factor subunit 1; |
PDBTitle: crystal structure of s.pombe erf1/erf3 complex
|
Resolution | 3.50 Å |
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | D | L | K | K | W | A | D | A | K | L | T | E | K | A | L | S | I | L | M | S | K | D | N | V | Y | K | Y | P | D | Q | D | V | M | N | V | L | L | K | G | M | T | L | F | L |
Query Conservation |   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|
|
|   |
|
|
|
|   |
|
|   |   |
|   |
|
|   |
|   |
|   |
|
|   |   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
Template Sequence |   |
L | L | N | V | K | Y | V | Q | E | K | K | L | I | Q | R | F | F | D | E | I | S | L | D | S | G | K | Y | C | F | G | V | V | D | T | M | N | A | L | Q | E | G | A | V | E | T | L |
Template Known Secondary structure |   |
G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|
|
|
| S |  |  |  |  |  |  |  |  |  | S | S |
|
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|