 |
Job Description | P27129 | Confidence | 4.28% | Date | Thu Jan 5 11:43:17 GMT 2012 |
Rank | 53 | Aligned Residues | 48 |
% Identity | 4% | Template | c2rffA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:putative nucleotidyltransferase; |
PDBTitle: crystal structure of a putative nucleotidyltransferase2 (np_343093.1) from sulfolobus solfataricus at 1.40 a3 resolution
|
Resolution | 1.40 Å |
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | N | R | H | I | N | L | D | F | Y | I | I | A | D | V | Y | N | D | . |
G | F | F | Q | K | I | A | K | L | A | E | Q | N | Q | L | R | I | T | L | Y | R | I | N | T | D | K | L | Q | C | L |
Query Conservation |   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|
|   | . |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|   |   |   |   |
|   |
|   |
|
Template Sequence |   |
Y | L | D | T | S | D | I | D | I | L | F | V | F | K | G | I | K | E | X | N | V | F | D | R | X | Y | X | V | S | R | F | I | R | G | N | V | D | Y | I | V | L | D | E | G | E | K | D | R | V |
Template Known Secondary structure |   |
|
| T | T |
|
|  |  |  |  |  |  |  | S | S |
| T | T |
|
|  |  |  |  |  |  |  |  | G | G | G |
|
| S | S |  |  |  |  |  |  |  | G | G | G | G | G | G | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|