Job Description P27129 Confidence 24.24% Date Thu Jan 5 11:43:17 GMT 2012 Rank 18 Aligned Residues 124 % Identity 19% Template c2p73A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative glycosyltransferase (mannosyltransferase) involved PDBTitle: crystal structure of a glycosyltransferase involved in the2 glycosylation of the major capsid of pbcv-1 Resolution 2.30 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		A	F	Q	L	L	G	L	T	L	D	R	L	L	Y	L	D	A	D	V	V	C	K	.	.	.	.	.	G	D	I	S	Q	L	L	H	L	G	L	N	G	A	V	A	A	V	V	K	D	V	E	P	M	Q	E	K	A	V	S	R	L	S	D	P	E	L	L	G	Q	Y	F	N	S	G	V	V	Y	L	D	L	K
Query Conservation																								.	.	.	.	.
Alig confidence								.																.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	E	K	F	P	.	S	T	E	W	F	L	W	L	D	S	D	V	Y	V	N	P	K	N	K	N	K	P	I	T	S	F	I	D	L	S	D	P	N	I	L	Y	H	T	F	H	E	A	P	W	G	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	N	T	G	V	K	F	V	H	K	D
Template Known Secondary structure							T	.	T		S							T	T					T	T	T	T	T	S		G	G	G	T						T	T									T	T	T	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T						G	G
Template Predicted Secondary structure								.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.															.	.	.	120	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		K	W	A	D	A	K	L	T	E	K	A	L	S	I	L	M	S	K	D	N	V	Y	K	Y	P	D	Q	D	V	M	N	V	L	L	.	.	.	.	K	G	M	T	L	F	L	P	R	E	Y	N	T	I	Y	T	I	K	S	E	L	K	D	K	T	H	Q	N	Y	K	K	L	I	T	E	S	T	L	L	I	H	Y
Query Conservation																																				.	.	.	.
Alig confidence															.	.																				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	E	I	E	K	I	V	W	S	L	R	N	.	.	E	A	P	W	N	T	F	P	Y	E	Q	K	T	V	Y	E	Y	V	F	P	R	I	P	G	R	Y	I	V	H	D	P	Y	T	L	N	C	I	.	.	.	.	.	.	.	.	.	.	.	.	V	K	A	Y	P	E	H	V	K	D	A	L	F	V	H	M
Template Known Secondary structure		G										T	T	T	.	.	S	T	T	T	T	S	T	T	T								T					S	T	T	S							T	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	T	T	T		T	T	T	G	G	G		S
Template Predicted Secondary structure															.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.													.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		266	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		195	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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