Return to main results Retrieve Phyre Job Id

Job DescriptionP27129
Confidence3.59%DateThu Jan 5 11:43:17 GMT 2012
Rank66Aligned Residues87
% Identity9%Templatec2c1iA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:peptidoglycan glcnac deacetylase; PDBTitle: structure of streptococcus pnemoniae peptidoglycan2 deacetylase (sppgda) d 275 n mutant.
Resolution1.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100.........
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  VAYGVDANYLDGVGVSITSIVLNNRHINLDFYIIADVYNDGFFQKIAKLAEQNQLRITLYRINTDKLQCLPCTQVWSRAM
Query Conservation 
    
 

     
 
 


 
       
 

   

      
  
       
    
              
   
Alig confidence 
























.











.












.


























Template Conservation 








    
  

  
    .
 




 
   .   
   
     .







  
  
  

      

 
Template Sequence  VALTFNDGPNPATTPQVLETLAKYD. IKATFFVLGKNV. SGNEDLVKRIKSE. GHVVGNHSWSHPILSQLSLDEAKKQIT
Template Known Secondary structure  S


TTTTT.



GGGT.TT
T.T


SS


GGGS
Template Predicted Secondary structure 








.



.


.











Template SS confidence 















































































   270.........280.........290.... .....300...... ...310......... 320.........330.........340......
 
   110.........
Predicted Secondary structure 
Query SS confidence 









Query Sequence  YFRLFAFQLL
Query Conservation 
 

 
  

Alig confidence 









Template Conservation       
    
Template Sequence  DTEDVLTKVL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 









   347..350......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions