Job Description P27129 Confidence 100.00% Date Thu Jan 5 11:43:17 GMT 2012 Rank 2 Aligned Residues 267 % Identity 19% Template c1ga8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:galactosyl transferase lgtc; PDBTitle: crystal structure of galacosyltransferase lgtc in complex2 with donor and acceptor sugar analogs. Resolution 2.00 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		N	V	A	Y	G	V	D	A	N	Y	L	D	G	V	G	V	S	I	T	S	I	V	L	N	N	R	H	I	N	L	D	F	Y	I	I	A	D	V	Y	N	D	G	F	F	Q	K	I	A	K	L	A	E	Q	N	Q	L	R	I	T	L	Y	R	I	N	T	D	K	L	Q	C	L	P	C	T	.	Q	V	W	S	R
Query Conservation																																																																												.
Alig confidence																																																																												.
Template Conservation
Template Sequence		D	I	V	F	A	A	D	D	N	Y	A	A	Y	L	C	V	A	A	K	S	V	E	A	A	H	P	D	T	E	I	R	F	H	V	L	D	A	G	I	S	E	A	N	R	A	A	V	A	A	N	L	R	G	G	G	G	N	I	R	F	I	D	V	N	P	E	D	F	A	G	F	P	L	N	I	R	H	I	S	I
Template Known Secondary structure									G	G	G																T	T	S									S	S												T	S	G	G	G	T	T	T								G	G	G	G	T	T	S					T	T			G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	Y	F	R	L	F	A	F	Q	L	L	G	L	T	L	D	R	L	L	Y	L	D	A	D	V	V	C	K	G	D	I	S	Q	L	L	H	L	G	L	N	G	A	V	A	A	V	V	K	D	V	E	P	M	Q	E	K	A	V	S	R	L	S	D	P	E	L	L	G	Q	Y	F	N	S	G	V	V	Y	L	D
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		T	T	Y	A	R	L	K	L	G	E	Y	I	A	.	D	C	D	K	V	L	Y	L	D	I	D	V	L	V	R	D	S	L	T	P	L	W	D	T	D	L	G	D	N	W	L	G	A	S	I	D	L	F	V	E	R	Q	E	G	Y	K	Q	K	I	G	X	A	D	G	E	Y	Y	F	N	A	G	V	L	L	I	N
Template Known Secondary structure		G	G	G	G	G	G	G							.	S		S							S	S					S							T				T	T		S											T	S	T	T					T	T			T	T	S
Template Predicted Secondary structure															.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		L	K	K	W	A	D	A	K	L	T	E	K	A	L	S	I	L	M	S	K	D	N	V	Y	K	Y	P	D	Q	D	V	M	N	V	L	L	K	G	M	T	L	F	L	P	R	E	Y	N	T	I	Y	T	I	K	S	.	.	.	E	L	K	D	K	T	H	Q	N	Y	K	K	L	I	T	E	S	T	L	L	I	H
Query Conservation																																																									.	.	.
Alig confidence																																																									.	.	.
Template Conservation
Template Sequence		L	K	K	W	R	R	H	D	I	F	K	X	S	S	E	W	V	E	Q	Y	K	D	V	X	Q	Y	Q	D	Q	D	I	L	N	G	L	F	K	G	G	V	C	Y	A	N	S	R	F	N	F	X	P	T	N	Y	A	F	X	A	S	R	H	T	D	P	L	Y	R	D	R	T	N	T	V	X	P	V	A	V	S	H
Template Known Secondary structure						T	T	S														T	T	T		S	S	T										T	T	S						G	G	G	S	B							T				S											S			S	S		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		Y	T	G	A	T	K	P	W	H	K	W	A	I	Y	P	S	V	K	Y	Y	K	I	A	L	E	N	.	.	.	.	.	S	P	W	K	D	D
Query Conservation																												.	.	.	.	.
Alig confidence																												.	.	.	.	.
Template Conservation
Template Sequence		Y	C	G	P	A	K	P	W	H	R	D	C	T	A	W	G	A	E	R	F	T	E	L	A	G	S	L	T	T	V	P	E	E	W	R	G	K
Template Known Secondary structure				S	S			T	T	S	T	T			S	T	T	T								T	T		S				G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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