 |
Job Description | P0AFR4 | Confidence | 7.10% | Date | Thu Jan 5 11:27:03 GMT 2012 |
Rank | 84 | Aligned Residues | 66 |
% Identity | 11% | Template | d1yksa2 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| RNA helicase
|
Resolution | 1.80 |
|
 |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
. | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . |  |  |
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | L | Q | E | K | R | K | T | I | G | M | R | V | P | S | N | P | I | A | Q | A | L | L | E | A | L | . |
. |
. |
G | E | P | M | L | S | T | S | L | M | L | P | G | S | E | F | T | E | S | D | P | E | E | I | K | D | . |
R | L | E | K | Q | V | D | L | I | I | H | G | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |   | . | . | . |
|   |
|
|   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   | . |   |   |   |   |   |
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|   |
|   |   |
|
|
|   |
|
Template Sequence |   |
D | W | I | L | A | D | K | R | P | T | A | W | F | L | P | S | I | R | A | A | N | V | M | A | A | S | L | R | K | A | G | K | S | V | V | V | L | N | R | K | T | F | E | K | K | P | D | F | I | L | A | T | D | I | A | E | M | G | A | N | L | C | V | E | R | V | L | D | C | R |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |
|  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
| S | S | S |
|
|
|
|
| S |  |  |  |  | S | S | S | T | T |
|
| T | T |
|
|
| S |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
354 | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|