Job Description P0AFR4 Confidence 100.00% Date Thu Jan 5 11:27:03 GMT 2012 Rank 4 Aligned Residues 183 % Identity 23% Template d1hrua_ SCOP info YrdC/RibB YrdC/RibB YrdC-like Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		D	N	P	Q	Q	R	L	I	N	Q	A	V	E	I	V	R	K	G	G	V	I	V	Y	P	T	D	S	G	Y	A	L	G	C	K	I	E	D	K	N	A	M	E	R	I	C	R	I	R	Q	L	P	D	G	H	N	F	T	L	M	C	R	D	L	S	E	L	S	T	Y	S	F	.	.	.	V	D	N	V	A	F
Query Conservation																																																																									.	.	.
Alig confidence																																																																									.	.	.
Template Conservation
Template Sequence		N	N	L	Q	R	D	A	I	A	A	A	I	D	V	L	N	E	E	R	V	I	A	Y	P	T	E	A	V	F	G	V	G	C	D	P	D	S	E	T	A	V	X	R	L	L	E	L	K	Q	R	P	V	D	K	G	L	I	L	I	A	A	N	Y	E	Q	L	K	P	Y	I	D	D	T	X	L	T	D	V	Q	R
Template Known Secondary structure																		T	T								S	S	S							T	T													T			G	G	G							S	S					G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	M	K	N	N	T	P	G	N	Y	T	F	I	L	K	G	T	K	E	V	P	R	R	L	L	Q	E	K	R	K	T	I	G	M	R	V	P	S	N	P	I	A	Q	A	L	L	E	A	L	G	E	P	M	L	S	T	S	L	M	L	P	G	S	E	F	T	E	S	D	P	E	E	I	K	D	R	L	E	K
Query Conservation
Alig confidence																								.																																											.
Template Conservation																								.																																											.
Template Sequence		E	T	I	F	S	R	W	P	G	P	V	T	F	V	F	P	A	P	A	T	T	P	.	R	W	L	T	G	R	F	D	S	L	A	V	R	V	T	D	H	P	L	V	V	A	L	C	Q	A	Y	G	K	P	L	V	S	T	S	A	N	L	S	G	L	P	.	P	C	R	T	V	D	E	V	R	A	Q	F	G	A
Template Known Secondary structure						T	T		S	S	S									T	T	S		.					T	T	S	S																				T	S							S			T	T	S		.				S										T
Template Predicted Secondary structure																								.																																											.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	D	L	I	I	H	G	G	Y	L	G	Q	K	P	T	T	V	I	D	L	T	D	D	T	P	V	V	V	R
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		A	F	P	V	V	P	G	E	T	G	G	R	L	N	P	S	E	I	R	D	A	L	T	G	E	.	.	L	F	R
Template Known Secondary structure		T	S		B							S	S									T	T	T	S	S	.	.	B
Template Predicted Secondary structure																											.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions