Job Description P0AFR4 Confidence 100.00% Date Thu Jan 5 11:27:03 GMT 2012 Rank 6 Aligned Residues 181 % Identity 18% Template c3tsuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate Resolution 1.92 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	I	N	Q	A	V	E	I	V	R	K	G	G	V	I	V	Y	P	T	D	S	G	Y	A	L	G	C	K	I	E	D	K	N	A	M	E	R	I	C	R	I	R	Q	L	P	D	G	H	N	F	T	L	M	C	R	D	L	S	E	L	S	T	Y	S	F	V	D	N	V	A	F	R	L	M	K	N	N	T
Query Conservation
Alig confidence																																																	.														.	.	.	.	.	.											.
Template Conservation																																																	.														.	.	.	.	.	.											.
Template Sequence		E	A	A	L	Q	A	A	I	A	Q	L	K	M	G	N	I	V	A	I	K	G	I	G	G	F	H	L	A	C	D	A	R	N	S	N	A	V	A	T	L	R	A	R	K	H	R	P	.	A	K	P	L	A	V	M	L	P	V	A	D	G	.	.	.	.	.	.	L	P	D	A	A	R	Q	L	L	T	.	T	P
Template Known Secondary structure														T	T								S	S	S							T	T															S	.	S	S							S			T	T	.	.	.	.	.	.	S									T	.	S	T
Template Predicted Secondary structure																																																	.														.	.	.	.	.	.											.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.	.		270	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	N	Y	T	F	I	L	K	G	T	K	E	V	P	R	R	L	L	Q	E	K	R	K	T	I	G	M	R	V	P	S	N	P	I	A	Q	A	L	L	E	A	L	G	E	P	M	L	S	T	S	L	M	L	P	G	S	E	F	T	E	S	D	P	E	E	I	K	D	R	L	E	K	Q	V	D	L	I	I	H
Query Conservation
Alig confidence																																																												.
Template Conservation																																																												.
Template Sequence		A	A	P	I	V	L	V	D	K	K	Y	V	P	E	L	C	D	D	I	A	P	G	L	N	E	V	G	V	M	L	P	A	N	P	L	Q	H	L	L	L	Q	E	L	Q	C	P	L	V	M	T	S	G	N	L	S	G	K	P	.	P	A	I	S	N	E	Q	A	L	E	D	L	Q	G	I	A	D	G	F	L	I
Template Known Secondary structure		T								G	G	G		T	T	S		T	T	S	S	T	T		S									S												S							S	S	S	T	T	S		.				S								T	T	T	T		S
Template Predicted Secondary structure																																																												.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		174	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		G	G	Y	L	.	.	G	Q	K	P	T	T	V	I	D	L	T	D	D	T	P	V	V	V	R	E	G	V	G	D	V	K	P	F	L
Query Conservation						.	.
Alig confidence						.	.										.	.	.
Template Conservation																	.	.	.
Template Sequence		H	N	R	D	I	V	Q	R	M	D	D	S	V	V	R	.	.	.	E	S	G	E	M	L	R	R	S	R	G	Y	V	P	D	A	L
Template Known Secondary structure			S	S				S									.	.	.	T	T	S							T	T	T	T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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