Job Description P0AFR4 Confidence 100.00% Date Thu Jan 5 11:27:03 GMT 2012 Rank 5 Aligned Residues 162 % Identity 23% Template c3l7vA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative uncharacterized protein smu.1377c; PDBTitle: crystal structure of a hypothetical protein smu.1377c from2 streptococcus mutans ua159 Resolution 2.26 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		M	S	Q	F	F	Y	I	H	P	D	N	P	Q	Q	R	L	I	N	Q	A	V	E	I	V	R	.	K	G	G	V	I	V	Y	P	T	D	S	G	Y	A	L	G	C	K	I	E	D	K	N	A	M	E	R	I	C	R	I	R	Q	L	P	D	G	H	N	F	T	L	M	C	R	D	L	S	E	L	S	T	Y	S
Query Conservation																											.
Alig confidence										.	.	.	.	.													.																			.	.
Template Conservation										.	.	.	.	.																																.	.
Template Sequence		X	T	K	H	I	H	W	D	.	.	.	.	.	G	N	L	S	Q	E	G	F	E	I	V	K	G	E	G	G	V	I	V	C	P	T	K	V	G	Y	I	I	X	T	S	.	.	D	K	K	G	L	E	R	K	F	E	A	K	K	R	N	R	N	K	P	G	V	V	L	C	G	S	X	E	E	L	R	A	L	A
Template Known Secondary structure										.	.	.	.	.	S	S											S	T	T								T	T							S	.	.	S												T			T	T	S							S	S								B
Template Predicted Secondary structure										.	.	.	.	.																																.	.
Template SS confidence
		1	.	.	.	.	.	.	.						.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.											.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.
Predicted Secondary structure																						.	.																	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																						.	.																	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		F	V	D	N	V	A	F	R	L	M	K	N	N	T	P	G	N	Y	T	F	.	.	I	L	K	G	T	K	E	V	P	R	R	L	L	Q	E	K	.	.	.	.	.	.	.	.	.	.	R	K	T	I	G	M	R	V	P	S	N	P	I	A	Q	A	L	L	E	A	.	.	.	.	L	G	E	P	M	L	S	T
Query Conservation																						.	.																	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																						.	.																	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		Q	L	T	P	E	I	D	A	F	Y	Q	K	H	W	D	E	D	I	L	L	G	C	I	L	P	W	K	A	E	A	Y	E	K	L	K	A	Y	G	D	G	R	E	E	L	X	T	D	I	R	G	T	S	C	F	V	I	K	F	G	V	A	G	E	Q	I	A	K	E	X	W	E	K	E	G	R	X	V	Y	A	S
Template Known Secondary structure																		T									B											T		S		T					S		T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	M	L	P	G	S	E	F	T	E	S	D	P	E	E	I	K	D	R	L	E	K	Q	V	D	L	I	I	H	G	G
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		S	A	N	N	R	G	K	V	.	.	.	.	.	.	E	G	I	G	E	R	I	E	S	X	V	D	L	V	I	E	A	D
Template Known Secondary structure						T	T		G	.	.	.	.	.	.	G	G	S								S	S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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