Job Description P0AFR4 Confidence 25.34% Date Thu Jan 5 11:27:03 GMT 2012 Rank 36 Aligned Residues 93 % Identity 11% Template c3hjhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair-coupling factor; PDBTitle: a rigid n-terminal clamp restrains the motor domains of the bacterial2 transcription-repair coupling factor Resolution 1.95 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Y	A	L	G	C	K	I	E	D	K	N	A	M	E	R	I	C	R	I	R	Q	L	P	D	G	H	N	F	T	L	M	C	R	D	L	S	E	L	S	T	Y	S	F	V	D	N	V	A	F	R	L	M	K	N	N	T	P	G	N	Y	T	F	I	L	K	G	T	K	E	V	P	R	R	L	L	Q	E	K
Query Conservation
Alig confidence							.	.	.	.	.																																			.	.	.	.					.	.	.	.
Template Conservation							.	.	.	.	.																																			.	.	.	.					.	.	.	.
Template Sequence		L	L	G	E	L	.	.	.	.	.	T	G	A	A	C	A	T	L	V	A	E	I	A	E	R	H	A	G	P	V	V	L	I	A	P	D	M	Q	N	A	L	R	L	H	.	.	.	.	D	E	I	S	.	.	.	.	Q	F	T	D	Q	M	V	M	N	L	A	D	W	E	T	L	P	Y	D	S	F	S	P	H
Template Known Secondary structure							.	.	.	.	.		T	T													S	S	S							S	S									.	.	.	.					.	.	.	.		T		S	S										S		T	T		S	S
Template Predicted Secondary structure							.	.	.	.	.																																			.	.	.	.					.	.	.	.
Template SS confidence
		18	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	T	I	G	M	R	V	P	S	N	P	I	A	Q	A	L	L	E	A	L	G	E	P	M	L	S	T	S	L
Query Conservation
Alig confidence									.	.	.											.
Template Conservation									.	.	.											.
Template Sequence		Q	D	I	I	S	S	R	.	.	.	L	S	T	L	Y	Q	L	P	T	M	.	Q	R	G	V	L	I	V	P	V
Template Known Secondary structure									.	.	.							G	G	G		.		S	S
Template Predicted Secondary structure									.	.	.											.
Template SS confidence
		85	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions