Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFR4
Confidence9.92%DateThu Jan 5 11:27:03 GMT 2012
Rank67Aligned Residues94
% Identity12%Templatec2eyqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  SGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEK
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Template Sequence  LLGEL. . . . . TGAACATLVAEIAERHAGPVVLIAPDMQNALRLH. . . . . . . DEISQFTDQMV. MNLADWETLPYDSFSPH
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   18.20.. .......30.........40.........50...... ...60....... ..70.........80....
 
   116...120.........130.........140......
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Query Sequence  RKTIGMRVPSNPIAQALLEALGEPMLSTSLM
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Template Sequence  QDIISSR. . . LSTLYQLPTM. QRGVLIVPVN
Template Known Secondary structure  ...GGG
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   85....90. ........100. ........110.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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