Job Description P0AFR4 Confidence 100.00% Date Thu Jan 5 11:27:03 GMT 2012 Rank 2 Aligned Residues 201 % Identity 28% Template c2eqaA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein st1526; PDBTitle: crystal structure of the hypothetical sua5 protein from2 sulfolobus tokodaii Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	Q	F	F	Y	I	H	P	D	N	P	Q	Q	R	L	I	N	Q	A	V	E	I	V	R	K	G	G	V	I	V	Y	P	T	D	S	G	Y	A	L	G	C	K	I	E	D	K	N	A	M	E	R	I	C	R	I	R	Q	L	P	D	G	H	N	F	T	L	M	C	R	D	L	S	E	L	S	T	Y	S	F	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		T	Q	I	I	K	I	D	P	L	N	P	E	I	D	K	I	K	I	A	A	D	V	I	R	N	G	G	T	V	A	F	P	T	E	T	V	Y	G	L	G	A	N	A	F	D	G	N	A	C	L	K	I	F	Q	A	K	N	R	P	V	D	N	P	L	I	V	H	I	A	D	F	N	Q	L	F	E	V	A	K	D
Template Known Secondary structure									S	S	S															T	T								S	S	S							T	T													T			T	T	S							S	S										S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	N	V	A	F	R	L	M	K	N	N	T	P	G	N	Y	T	F	I	L	K	G	T	K	E	V	P	R	R	L	L	Q	E	K	R	K	T	I	G	M	R	V	P	S	N	P	I	A	Q	A	L	L	E	A	L	G	E	P	M	L	S	T	S	L	M	L	P	G	S	E	F	T	E	S	D	P	E	E	I
Query Conservation
Alig confidence																														.																																											.
Template Conservation																														.																																											.
Template Sequence		I	P	D	K	V	L	E	I	A	Q	I	V	W	P	G	P	L	T	F	V	L	K	K	T	E	R	V	P	.	K	E	V	T	A	G	L	D	T	V	A	V	R	X	P	A	H	P	I	A	L	Q	L	I	R	E	S	G	V	P	I	A	A	P	S	A	N	L	A	T	R	P	.	S	P	T	K	A	E	D	V
Template Known Secondary structure															S	S	S									T	T	S		.					T	T		S																				T	S						B	S	S		T	T	S		.				S
Template Predicted Secondary structure																														.																																											.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		K	D	R	L	E	K	Q	V	D	L	I	I	H	G	G	Y	L	.	G	Q	K	P	T	T	V	I	D	L	T	D	D	T	P	V	V	V	R	E	G	V	G	D	V	K	P	F
Query Conservation																			.
Alig confidence																			.														.
Template Conservation																																	.
Template Sequence		I	V	D	L	N	G	R	V	D	V	I	I	D	G	G	H	T	F	F	G	V	E	S	T	I	I	N	V	T	V	E	.	P	V	L	L	R	P	G	P	F	T	I	E	E	L
Template Known Secondary structure						T	T	T	S	S									S	S		S								S			.								S	S
Template Predicted Secondary structure																																	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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