 |
Job Description | P0ADC6 | Confidence | 4.65% | Date | Thu Jan 5 11:20:36 GMT 2012 |
Rank | 23 | Aligned Residues | 67 |
% Identity | 13% | Template | c2cybA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:tyrosyl-trna synthetase; |
PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with2 l-tyrosine from archaeoglobus fulgidus
|
Resolution | 1.80 Å |
|
 |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | I | F | F | P | M | A | A | L | L | G | A | L | L | G | L | G | M | L | A | Q | R | S | E | L | V | V | M | Q | A | S | G | F | T | R | M | Q | V | A | L | S | V | M | K | T | A | I | P | L | V | L | L | T | M | A | I | G | E | W | V | A | P | Q | G | E | Q | M | A | R | N | Y | R |
Query Conservation |   |
  |   |   |
|
|   |   |   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|   |
|
|
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|
|   |   | . | . | . | . | . |   |   |   |   |
|   |   |
|   |
|
|   |   |   |
|   |
Template Sequence |   |
R | D | Y | V | L | D | V | L | K | M | A | R | I | T | T | L | N | R | A | R | R | S | M | D | E | V | S | R | R | K | E | D | P | M | V | S | Q | M | I | Y | P | L | M | Q | A | L | D | I | A | H | L | . |
. |
. |
. |
. |
G | V | D | L | A | V | G | G | I | D | Q | R | K | I | H | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  | T | T | T | T |
| S |
| S | S | S |
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | T |
| S |  |  |  |  |  | G | G | G |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|