Job Description P0ADC6 Confidence 4.03% Date Thu Jan 5 11:20:36 GMT 2012 Rank 38 Aligned Residues 111 % Identity 12% Template c2bg9C_ PDB info PDB header:ion channel/receptor Chain: C: PDB Molecule:acetylcholine receptor protein, delta chain; PDBTitle: refined structure of the nicotinic acetylcholine receptor2 at 4a resolution. Resolution 4.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																															.															.	.	.	.
Query SS confidence																																																															.															.	.	.	.
Query Sequence		Y	I	G	K	T	I	F	T	T	I	M	M	T	L	F	M	L	V	S	L	S	G	I	I	K	F	V	D	Q	L	K	K	A	G	Q	G	S	Y	D	A	L	G	A	G	M	Y	T	L	L	S	V	P	K	D	V	Q	I	F	F	P	M	.	A	A	L	L	G	A	L	L	G	L	G	M	L	A	.	.	.	.
Query Conservation																																																															.															.	.	.	.
Alig confidence																																																								.							.															.	.	.	.
Template Conservation																																																								.
Template Sequence		Y	V	I	N	F	I	T	P	C	V	L	I	S	F	L	A	A	L	A	F	Y	L	P	A	E	S	G	E	K	M	S	T	A	I	C	V	L	L	A	Q	A	V	F	L	L	L	T	S	Q	R	L	P	E	T	.	A	L	A	V	P	L	I	G	K	Y	L	M	F	I	M	S	L	V	T	G	V	V	V	N	C
Template Known Secondary structure																												T	T																											.			T	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
																																		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	S	E	L	V	V	M	Q	A	S	G	F	T	R	M	Q	V	A	L	S	V	M	K	T	A	I	P	L	V	L	L	T	M	A	I	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	V	L	N	F	H	F	R	T	P	S	T	H	S	G	I	D	S	T	N	Y	I	V	K	Q	I	K	E	K	N	A	Y	D	E	E	V	G	N	W	N	L	V	G	Q	T	I	D	R	L	S	M	F	I	I	T	P	V	M	V	L	G	T	I	F	I	F	V	M
Template Known Secondary structure											S	T	T	T																																T	T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions