Job Description P0ADC6 Confidence 4.06% Date Thu Jan 5 11:20:36 GMT 2012 Rank 37 Aligned Residues 112 % Identity 12% Template c2bg9A_ PDB info PDB header:ion channel/receptor Chain: A: PDB Molecule:acetylcholine receptor protein, alpha chain; PDBTitle: refined structure of the nicotinic acetylcholine receptor2 at 4a resolution. Resolution 4.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	G	K	T	I	F	T	T	I	M	M	T	L	F	M	L	V	S	L	S	G	I	I	K	F	V	D	Q	L	K	K	A	G	Q	G	S	Y	D	A	L	G	A	G	M	Y	T	L	L	S	V	P	K	D	V	Q	I	F	F	P	M	A	A	L	L	G	A	L	L	G	L	G	M	L	A	Q	R	S	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	V	N	V	I	I	P	C	L	L	F	S	F	L	T	V	L	V	F	Y	L	P	T	D	S	G	E	K	M	T	L	S	I	S	V	L	L	S	L	T	V	F	L	L	V	I	V	E	L	I	P	S	T	S	S	A	V	P	L	I	G	K	Y	M	L	F	T	M	I	F	V	I	S	S	I	I	V	T	V
Template Known Secondary structure																												G	G	G																													S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		90	.	.	.	.	.																																					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	M	Q	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	T	R	M	Q	V	A	L	S	V	M	K	T	A	I	P	L	V	L	L	T	M	A	I	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	I	N	T	H	H	R	S	P	S	T	H	S	A	I	E	G	V	K	Y	I	A	E	H	M	K	S	D	E	E	S	S	N	A	A	E	E	W	K	Y	V	A	M	V	I	D	H	I	L	L	C	V	F	M	L	I	C	I	I	G	T	V	S	V	F	A	G
Template Known Secondary structure										S	T	T	T																											T	T	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions