 |
Job Description | Q46799 | Confidence | 37.80% | Date | Thu Jan 5 12:34:21 GMT 2012 |
Rank | 43 | Aligned Residues | 49 |
% Identity | 37% | Template | d2cpqa1 |
SCOP info | Eukaryotic type KH-domain (KH-domain type I)
| Eukaryotic type KH-domain (KH-domain type I)
| Eukaryotic type KH-domain (KH-domain type I)
|
Resolution | UNK |
|
 |
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | D | E | Q | A | R | S | L | P | G | V | L | A | I | F | T | W | E | D | V | P | D | I | P | F | A | T | A | G | H | A | W | T | L | D | E | N | K | R | D | T | A | D | R | A | L | L | T | R | H | V | R | H | H | G | D | A | V | A | I | V | V | A | R | D | E | L | T | A | E | K | A | A | Q | L | V | S | I | E | W |
Query Conservation |   |
|   |
|   |
|   |
|   |
|
|
|   |   |
|   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |
|
|
|
|   |   |
|   |
|
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|
Template Sequence |   |
N | I | Q | Q | A | R | K | V | P | G | V | T | A | I | E | L | D | E | D | T | G | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | R | I | Y | G | E | S | A | D | A | V | K | K | A | R | G | F | L | E | F | V | E |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | S | T | T |  |  |  |  |  |  |  | T | T | T | T |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . |
  |
  |   |
123 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
Q | E | L | P | V |
Query Conservation |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
Template Sequence |   |
D | F | I | Q | V |
Template Known Secondary structure |   |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
  |   |
284 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|