Return to main results Retrieve Phyre Job Id

Job DescriptionQ46799
Confidence100.00%DateThu Jan 5 12:34:21 GMT 2012
Rank17Aligned Residues587
% Identity25%Templated1dgja4
SCOP infoMolybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140..... ....150.........160..... ....170.........180.........190.........200.....
Predicted Secondary structure 










.












..


















Query SS confidence 
















.



















. .







































Query Sequence  TTPEAALAEDAAPIHNG. GNLLKQSTMSTGNVQQTIDA. . ADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSST
Query Conservation       
    
  
   . 
         

       ..
  


         
  


    
    

 
 
  

Alig confidence 
















.



















..







































Template Conservation 
   


  


 

    

        

   
     
  


  
      
  


   

     
 
 
   
Template Sequence  MSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVVAEGSYYTQRQPHLPIEPDVGYGYINEQGQVVIHSKS
Template Known Secondary structure 

STT


SBTTB
SSS
SS
TTS






SS


TTS


Template Predicted Secondary structure 






































Template SS confidence 















































































   311........320.........330.........340.........350.........360.........370.........380.........390
 
   206...210.........220..... ....230.........240.........250.........260.........270.........280....
Predicted Secondary structure 




.
























Query SS confidence 



















.


























































Query Sequence  QIPHIVRRVVGQALDIPWSC. VRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKVSLSREECFLATRTRHAFTIDG
Query Conservation 
 
      

  



   .
 
    





 
         
  

   




   

 
       
       
Alig confidence 



















.




















.




































Template Conservation 
 
      

  


     
 
    


 

 
      .  

 

   




    
 
       
       
Template Sequence  VAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPTME. ALVGVAVMATGRPCHLRYNYEQQQNYTGKRSPFWTTM
Template Known Secondary structure  S
T

TTTT


S

TTGGGS
SS.
S


SS
B


Template Predicted Secondary structure 























.








Template SS confidence 















































































   391........400.........410.........420.........430.. .......440.........450.........460.........
 
   285....290.........300.........310.........320.........330.........340.........350.........360....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  QMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESM
Query Conservation    
   

 
 
       
 

                   
           
 

  
  
 

 
  
  

 
  
Alig confidence 















































































Template Conservation        

 
 
       
 


                
 
 
 
       
 

  
 

 

 
 

  

 
  
Template Sequence  RYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSEVL
Template Known Secondary structure 
TTS


S

TTTTTTB

S

SS

B


TTTT
Template Predicted Secondary structure 


































Template SS confidence 















































































   470.........480.........490.........500.........510.........520.........530.........540.........
 
   365....370.........380.........390.........400.........410.........420.........430.........440....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  LDDAATALGIDPVEIRLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVACFSYTSN
Query Conservation 

  
  

 

 
 
  
    
      
           
    
   
  
            



 
       
Alig confidence 




























.



























.




















Template Conservation 

 

  

 

 
 
 

    
     .
           
               .        



 
      
Template Sequence  MDELAEKLGMDPFELRALNCYREGDTTSS. GQIPEVMSLPEMFDKMRPYYEESKKRVK. ERSTAEIKRGVGVALGVYGAG
Template Known Secondary structure  T

B

TT


TT.S


S


.TT

SSS
Template Predicted Secondary structure 












.
















.









Template SS confidence 















































































   550.........560.........570........ .580.........590.........600...... ...610.........620.......
 
   445....450.........460.........470.........480......... 490.........500.........510.........520.
Predicted Secondary structure 




















...

















Query SS confidence 












































. . .































Query Sequence  TWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAET. . . VGVPVSDVRVISTQDTDVTPFDPGAFASRQSY
Query Conservation            
 
 
  

 
 
  
    


  
   

 
  ...



 
 
 
    

   
   

  

 
 
Alig confidence 
..









































...











.


















Template Conservation   ..       
 
 
  

 
 
  
    


  
   




    



   
 
  . 

   
   

  

 
 
Template Sequence  L. . DGPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVM. NDTSKTPNSGPAGGSRSQV
Template Known Secondary structure  S..SSS

TTS




SSS
TGGGT

GGG.SBTTTS




S
TT
TTT
Template Predicted Secondary structure 
..


















.











Template SS confidence 















































































   628 .630.........640.........650.........660.........670.........680..... ....690.........700....
 
   522.......530.........540.........550.........560.........570.........580.........590.........600.
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  VAAPALRSAALLLKEKIIAHAAVMLHQSAMNLTLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTN
Query Conservation    
 

  
   
   
   

              
                                           
Alig confidence 














































....................












Template Conservation    
 

  

  
   
   

                         ....................             
Template Sequence  VTGNAIRVACEMLIEGMRKPGGGFFTPAEMKAEGRPMRYDGKWTAPA. . . . . . . . . . . . . . . . . . . . KDCDAKGQGSPFA
Template Known Secondary structure  TB
SSSSB

TT



S
....................B


TTS
SB

S
Template Predicted Secondary structure 












....................











Template SS confidence 















































































   705....710.........720.........730.........740.........750. ........760....
 
   602.......610.........620.........630.........640.........650.........660.........670.........680.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  PPAFGCTFVDLTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGVVRNPNLLDYKMP
Query Conservation      

   




  

 
 
 
   
 
 
 



    


 

   


 

 
    
   
         
 

Alig confidence 



























































.....














Template Conservation       
  





  

 
 
     
 
 
 



  
 


 

   


 

 

 ..... 
         
 

Template Sequence  CYMYGLFLTEVAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDY. . . . . EDLKKHSTMGGAGIP
Template Known Secondary structure  TTTT
BS
S
T


.....
STTTTSSTTTTT

Template Predicted Secondary structure 












.....











Template SS confidence 















































































   765....770.........780.........790.........800.........810.........820.... .....830.........
 
   682..... ..690.........700.........710.........720.........730.........740......
Predicted Secondary structure 





.



























Query SS confidence 





.


























































Query Sequence  TMPDLP. QLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMATGVAINTLPLTPKRLYEEF
Query Conservation     


. 
 
   
      
 



 

        

 


  
 
 
   

 


 
  

Alig confidence 





.


























































Template Conservation     
 
  
 
   
 
    
 



 

       


 


  
 
 
   

 


 

 

Template Sequence  SIKMIPDDIEIVYVETPRKDGPFGASGVGEMPLTAPHAAIINGIYNACGARVRHLPARPEKVLEAM
Template Known Secondary structure 
GGGS
S





TTSGGGB


TTGGGSSS



BS


T
Template Predicted Secondary structure 






























Template SS confidence 

































































   840.........850.........860.........870.........880.........890.........900.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions