Job Description Q46799 Confidence 100.00% Date Thu Jan 5 12:34:21 GMT 2012 Rank 19 Aligned Residues 317 % Identity 28% Template c3hrdF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nicotinate dehydrogenase medium molybdopterin PDBTitle: crystal structure of nicotinate dehydrogenase Resolution 2.20 Å

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		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	R	G	V	G	V	A	C	F	S	Y	T	S	N	T	W	P	V	G	V	E	I	A	G	A	R	L	L	M	N	Q	D	G	T	I	N	V	Q	S	G	A	T	E	I	G	Q	G	A	D	T	V	F	S	Q	M	V	A	E	T	V	G	V	P	V	S	D	V	R	V	I	S	T	Q	D	T	D	V	T	P
Query Conservation
Alig confidence																						.																																																				.
Template Conservation																						.																																																				.
Template Sequence		K	K	R	G	K	G	V	G	S	M	W	Y	G	I	G	N	T	G	L	P	.	N	P	A	A	A	F	V	E	I	H	G	D	G	S	A	N	V	M	F	G	A	A	D	I	G	Q	G	S	G	T	A	M	A	Q	I	A	A	E	E	L	G	L	D	Y	E	K	I	H	V	T	W	.	G	D	T	M	V	T	P
Template Known Secondary structure																S	S	T	T	S		.											T	T	S											S	S	S															T			G	G	G						.	S		T	T	T	S
Template Predicted Secondary structure																						.																																																				.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		F	D	P	G	A	F	A	S	R	Q	S	Y	V	A	A	P	A	L	R	S	A	A	L	L	L	K	E	K	I	I	A	H	A	A	V	M	L	H	Q	S	A	M	N	L	T	L	I	K	G	H	I	V	L	V	E	R	P	E	E	P	L	M	S	L	K	D	L	A	M	D	A	F	Y	H	P	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																																														.																.	.	.	.
Template Conservation																																																														.
Template Sequence		D	G	G	A	T	S	A	S	R	Q	T	L	I	T	G	N	A	V	I	L	A	C	R	Q	A	K	E	T	L	A	K	T	A	A	E	K	L	D	C	A	P	E	E	L	S	F	R	D	N	T	V	F	I	T	A	D	P	E	R	S	.	M	T	Y	G	E	L	M	A	A	M	K	A	A	G	R	M	A	V	G
Template Known Secondary structure						S		T	T																											T	T	S		S	S						S	T	T	B				S	S	S	S	S	S			.		B											T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
								586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	R	G	G	Q	L	S	A	E	S	S	I	K	T	T	T	N	P	P	A	F	G	C	T	F	V	D	L	T	V	D	I	A	L	C	K	V	T	I	N	R	I	L	N	V	H	D	S	G	H	I	L	N	P	L	L	A	E	G	Q	V	H	G	G	M	G	M	G	I	G	W	A	L	F	E
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	S	Y	N	P	N	T	T	G	L	A	P	E	N	M	S	G	I	P	F	E	V	Y	S	Y	A	T	T	I	A	E	V	E	V	D	T	E	T	G	E	V	D	V	L	K	V	V	S	A	H	D	V	G	T	P	I	N	R	S	M	V	E	G	Q	I	E	G	G	V	T	M	G	Q	G	F	V	L	M	E
Template Known Secondary structure														T	T	T			S				S															T	T	T															S	S		S																						T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	I	I	D	A	K	S	G	V	V	R	N	P	N	L	L	D	Y	K	M	P	T	M	P	D	L	P	Q	L	E	S	A	F	V	E	I	N	E	P	Q	S	A	Y	G	H	K	S	L	G	E	P	P	I	I	P	V	A	A	A	I	R	N	A	V	K	M	A	T	G	V	A	I	N	T	L	P	L	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	E	V	N	T	K	N	G	A	I	K	N	P	S	M	S	K	Y	I	I	P	S	N	R	D	V	P	E	I	H	S	I	L	V	E	S	E	G	G	P	G	P	F	G	A	K	G	V	G	E	P	A	L	I	P	M	I	P	A	V	V	A	A	I	E	D	A	L	G	T	R	F	T	H	T	P	I	M	P
Template Known Secondary structure							T	T	T	T			S			S	T	T	T	S					T	T	T													S			S	G	G	G					T	T	T	T	T	T	T														T					S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		740	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	Y	E	E	F	H	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	I	V	A	A	V	K	A	Q
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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