Job Description Q46799 Confidence 100.00% Date Thu Jan 5 12:34:21 GMT 2012 Rank 18 Aligned Residues 404 % Identity 32% Template c3hrdE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:nicotinate dehydrogenase large molybdopterin PDBTitle: crystal structure of nicotinate dehydrogenase Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	A	I	A	K	V	T	G	R	A	R	Y	T	D	D	Y	V	M	A	G	M	C	Y	A	K	Y	V	R	S	P	I	A	H	G	Y	A	V	S	I	N	D	E	Q	A	R	S	L	P	G	V	L	A	I	F	T	W	E	D	V	P	D	I	P	F	A	T	A	G	H	A	W	T	L	D	E	N	K	R
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		K	V	D	S	L	E	K	V	M	G	T	A	K	F	A	A	D	Y	S	F	P	D	M	L	Y	A	G	V	F	R	S	T	V	P	H	A	R	I	V	S	L	D	L	S	K	A	R	A	I	D	G	V	E	A	V	L	D	Y	H	A	I	P	G	K	N	R	F	G	I	I	I	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T							T				B	G	G	G				T	T										S	S	S	S	B												T	S	T	T							G	G	G		S	S				B		S	S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	A	D	R	A	L	L	T	R	H	V	R	H	H	G	D	A	V	A	I	V	V	A	R	D	E	L	T	A	E	K	A	A	Q	L	V	S	I	E	W	Q	E	L	P	V	I	T	T	P	E	A	A	L	A	E	D	A	A	P	I	H	N	G	G	N	L	L	K	Q	S	T	M	S	T	G	N	V	Q	Q
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	K	D	E	P	C	L	V	D	D	K	V	R	R	Y	G	D	A	I	A	V	V	A	A	Q	T	P	D	L	V	Q	E	A	L	D	A	I	T	I	E	Y	E	E	L	E	G	I	F	T	M	E	R	A	L	E	E	D	S	P	A	I	H	G	D	T	N	I	H	Q	V	K	H	L	E	Y	G	D	V	D	A
Template Known Secondary structure		.			B		S	S		S	S		B		S	T	T									S	S										T													S						S	T	T	S			S	S	T	T		S										S
Template Predicted Secondary structure		.
Template SS confidence
			85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	D	A	A	D	Y	Q	V	Q	G	H	Y	Q	T	P	V	I	Q	H	C	H	M	E	S	V	T	S	L	A	W	M	E	D	D	S	R	I	T	I	V	S	S	T	Q	I	P	H	I	V	R	R	V	V	G	Q	A	L	D	I	P	W	S	C	V	R	V	I	K	P	F	V	G	G	G	F	G	N	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	K	Q	C	D	I	V	V	E	D	T	Y	S	T	H	R	L	T	H	M	F	I	E	P	D	A	G	V	S	Y	Y	D	N	E	G	M	L	T	V	V	V	S	T	Q	N	P	H	Y	D	R	G	E	V	A	G	M	L	A	L	P	N	S	K	V	R	I	I	Q	A	T	T	G	G	G	F	G	G	K	L
Template Known Secondary structure			T	T	S		S																	S	S										T	T	S									S														T			G	G	G							B					T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	E	E	P	M	A	A	F	L	T	S	K	L	G	G	I	P	V	K	V	S	L	S	R	E	E	C	F	L	A	T	R	T	R	H	A	F	T	I	D	G	Q	M	G	V	N	R	D	G	T	L	K	G	Y	S	L	D	V	L	S	N	T	G	A	Y	A	S	H	G	H	S	I	A	S	A	G	G	N
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		D	L	S	V	Q	.	C	H	C	A	L	L	T	Y	H	T	K	K	P	V	K	M	V	R	S	R	E	E	S	T	T	V	S	S	K	R	H	P	M	T	M	H	C	K	T	G	A	T	K	D	G	R	L	Q	A	V	Q	V	E	M	F	G	D	T	G	A	Y	A	S	Y	G	P	A	V	I	T	R	A	T	V
Template Known Secondary structure		S		S	S		.												S															S		B														T	T																S	S		T	T
Template Predicted Secondary structure							.
Template SS confidence
		244	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	A	Y	L	Y	P	R	C	A	Y	A	Y	S	S	K	T	C	Y	T	N	L	P	S	A	G	A	M	R	G	Y	G	A	P	Q	V	V	F	A	V	E	S	M	L	D	D	A	A	T	A	L	G	I	D	P	V	E	I	R	L	R	N	A	A	R	E	G	D	A	N	P	L	T	G	K	R	I	Y	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	C	M	G	P	Y	V	V	P	N	V	R	V	D	A	K	F	V	Y	T	N	N	P	M	S	G	A	F	R	G	F	G	V	P	Q	A	S	V	C	H	E	G	Q	M	N	A	L	A	K	A	L	G	M	D	P	I	D	I	R	I	L	N	A	H	Q	V	G	A	K	L	A	T	G	Q	V	L	E	N	S	V
Template Known Secondary structure			S	S		S	B			S												S	S	S		B				T	T	T	T																		T	T	T			T	T							B			T	T		B		T	T	S		B			S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		402	.	.	.	.	.	.	.	410	.	.	.					.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		G	L	P	E	C	L	E	K	G	R	K	I	.	.	.	.	F	E	W
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		G	L	I	E	T	L	E	K	A	R	E	K	A	V	E	V	M	G	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.