Job Description Q46799 Confidence 100.00% Date Thu Jan 5 12:34:21 GMT 2012 Rank 7 Aligned Residues 714 % Identity 25% Template c3eubL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of desulfo-xanthine oxidase with xanthine Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		R	V	D	A	I	A	K	V	T	G	R	A	R	Y	T	D	D	Y	.	V	M	A	G	M	C	Y	A	K	Y	V	R	S	P	I	A	H	G	Y	A	V	S	I	N	D	E	Q	A	R	S	L	P	G	V	L	A	I	F	T	W	E	D	V	P	D	I	P	F	A	T	A	G	H	A	W	T	L	D	E	N	K
Query Conservation																				.
Alig confidence																				.																																																						.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		H	L	A	A	A	M	Q	A	S	G	E	A	V	Y	C	D	D	I	P	R	Y	E	N	E	L	F	L	R	L	V	T	S	T	R	A	H	A	K	I	K	S	I	D	V	S	E	A	Q	K	V	P	G	F	V	C	F	L	S	A	D	D	I	P	G	S	N	E	T	G	L	F	N	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T							T		S			G	G	G	S				T	T										S	S	S	S									T	T	T	T	T	S	T	T							G	G	G		S	S		S			S	T	T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	T	A	D	R	A	L	L	T	R	H	V	R	H	H	G	D	A	V	A	I	V	V	A	R	D	E	L	T	A	E	K	A	A	Q	L	V	S	I	E	W	Q	E	L	P	V	I	T	T	P	E	A	A	L	A	E	D	A	A	P	I	H	N	G	G	N	L	L	K	Q	S	T	M	S	T	G	N	V	Q
Query Conservation
Alig confidence		.	.	.																																																														.	.	.	.	.	.	.
Template Conservation		.	.	.																																																														.	.	.	.	.	.	.
Template Sequence		.	.	.	D	E	T	V	F	A	K	D	T	V	T	C	V	G	H	I	I	G	A	V	V	A	D	T	P	E	H	A	E	R	A	A	H	V	V	K	V	T	Y	E	D	L	P	A	I	I	T	I	E	D	A	I	K	N	N	S	F	Y	G	S	E	.	.	.	.	.	.	.	L	K	I	E	K	G	D	L	K
Template Known Secondary structure		.	.	.				S	S			S				S	T	T									S	S										T													S							T	T							.	.	.	.	.	.	.						S		S	T
Template Predicted Secondary structure		.	.	.																																																														.	.	.	.	.	.	.
Template SS confidence
					651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.								.	.	.	.	.	.	.	.	720
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		Q	T	I	D	A	A	D	Y	Q	V	Q	G	H	Y	Q	T	P	V	I	Q	H	C	H	M	E	S	V	T	S	L	A	W	M	E	D	.	D	S	R	I	T	I	V	S	S	T	Q	I	P	H	I	V	R	R	V	V	G	Q	A	L	D	I	P	W	S	C	V	R	V	I	K	P	F	V	G	G	G	F	G	N
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		K	G	F	S	E	A	D	N	V	V	S	G	E	L	Y	I	G	G	Q	D	H	F	Y	L	E	T	H	C	T	I	A	I	P	K	G	E	E	G	E	M	E	L	F	V	S	T	Q	N	A	M	K	T	Q	S	F	V	A	K	M	L	G	V	P	V	N	R	I	L	V	R	V	K	R	M	G	G	G	F	G	G
Template Known Secondary structure		T						S												B					S	S										S	S	T	T									S														T	S		G	G	G									S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800
		240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		K	Q	D	V	L	E	.	E	P	M	A	A	F	L	T	S	K	L	G	G	I	P	V	K	V	S	L	S	R	E	E	C	F	L	A	T	R	T	R	H	A	F	T	I	D	G	Q	M	G	V	N	R	D	G	T	L	K	G	Y	S	L	D	V	L	S	N	T	G	A	Y	A	S	H	G	H	S	I	A	S	A
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		K	E	T	R	S	T	L	V	S	V	A	V	A	L	A	A	Y	K	T	G	H	P	V	R	C	M	L	D	R	N	E	D	M	L	I	T	G	G	R	H	P	F	L	A	R	Y	K	V	G	F	M	K	T	G	T	I	V	A	L	E	V	D	H	Y	S	N	A	G	N	S	R	D	L	S	H	S	I	M	E	R
Template Known Secondary structure		T	T	S	T	T															S	S															S			B													T	T																S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		801	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	N	K	V	A	Y	L	Y	P	R	C	A	Y	A	Y	S	S	K	T	C	Y	T	N	L	P	S	A	G	A	M	R	G	Y	G	A	P	Q	V	V	F	A	V	E	S	M	L	D	D	A	A	T	A	L	G	I	D	P	V	E	I	R	L	R	N	A	A	R	E	G	D	A	N	P	L	T	G	K	R	I
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		A	L	F	H	M	D	N	C	Y	K	I	P	N	I	R	G	T	G	R	L	C	K	T	N	L	S	S	N	T	A	F	R	G	F	G	G	P	Q	A	L	F	I	A	E	N	W	M	S	E	V	A	V	T	C	G	L	P	A	E	E	V	R	W	K	N	M	Y	K	E	G	D	L	T	H	F	.	N	Q	R	L
Template Known Secondary structure						T	T	T	T	B			S												S	S							T	T	T	T																			T	T										T	B			T	T		B		T	T	.			B
Template Predicted Secondary structure																																																																													.
Template SS confidence
		881	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.		.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.				.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		Y	S	A	G	L	P	E	C	L	E	K	G	R	K	I	F	E	W	E	K	R	R	A	.	.	.	E	C	Q	N	Q	Q	G	N	L	R	R	G	V	G	V	A	C	F	S	Y	T	S	N	T	W	P	V	G	V	E	I	A	G	A	R	L	L	M	N	Q	D	G	T	I	N	V	Q	S	G	A	T	E	I	G
Query Conservation																									.	.	.
Alig confidence																									.	.	.
Template Conservation
Template Sequence		E	G	F	S	V	P	R	C	W	D	E	C	L	K	S	S	Q	Y	Y	A	R	K	S	E	V	D	K	F	N	K	E	N	C	W	K	K	R	G	L	C	I	I	P	T	K	F	G	I	S	F	T	V	P	F	L	N	Q	A	G	A	L	I	H	V	Y	T	D	G	S	V	L	V	S	H	G	G	T	E	M	G
Template Known Secondary structure			S															T																S	S															S		S	S	G	G	G											T	T	S							S				S	S
Template Predicted Secondary structure
Template SS confidence
		960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	A	D	T	V	F	S	Q	M	V	A	E	T	V	G	V	P	V	S	D	V	R	V	I	S	T	Q	D	T	D	V	T	P	F	D	P	G	A	F	A	S	R	Q	S	Y	V	A	A	P	A	L	R	S	A	A	L	L	L	K	E	K	I	I	A	H	A	A	V	M	L	H	Q	S	A	M	N	L	T	L
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		Q	G	L	H	T	K	M	V	Q	V	A	S	K	A	L	K	I	P	I	S	K	I	Y	I	.	S	E	T	S	T	N	T	V	P	N	S	S	P	T	A	A	S	V	S	T	D	I	Y	G	Q	A	V	Y	E	A	C	Q	T	I	L	K	R	L	E	P	F	K	K	K	N	P	D	G	S	W	E	D	W	V	M
Template Known Secondary structure		S															T	S		G	G	G				.					T	T	T	S		S				S		T	T																													T	T	S
Template Predicted Secondary structure																										.
Template SS confidence
		1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.		.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	G	H	I	V	L	V	E	R	P	E	E	P	L	M	S	L	K	D	L	A	M	D	A	F	Y	H	P	E	R	G	G	Q	L	S	A	E	S	S	I	K	T	T	T	N	P	P	A	F	G	C	T	F	V	D	L	T	V	D	I	A	L	C	K	V	T	I	N	R	I	L	N	V	H	D	S	G	H	I
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		A	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	R	V	S	L	S	T	T	G	F	Y	R	T	P	N	L	.	G	Y	S	F	E	T	N	S	G	N	A	F	H	Y	F	T	Y	G	V	A	C	S	E	V	E	I	D	C	L	T	G	D	H	K	N	L	R	T	D	I	V	M	D	V	G	S	S
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.		T	T												S	S		.			B	T	T	T	T	B	S		S		S															T	T	T															B	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		1119	1120	.													.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.		.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.		.	.	690	.	.	.	.		.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure																																																						.								.
Query SS confidence																																																						.								.
Query Sequence		L	N	P	L	L	A	E	G	Q	V	H	G	G	M	G	M	G	I	G	W	A	L	F	E	E	M	I	I	D	A	K	S	G	V	V	R	N	P	N	L	L	D	Y	K	M	P	T	M	P	D	L	P	.	Q	L	E	S	A	F	V	.	E	I	N	E	P	Q	S	A	Y	G	H	K	S	L	G	E	P	P	I
Query Conservation																																																						.								.
Alig confidence																															.																							.								.
Template Conservation																															.
Template Sequence		L	N	P	A	I	D	I	G	Q	V	E	G	A	F	V	Q	G	L	G	L	F	T	L	E	E	L	H	Y	S	.	P	E	G	S	L	H	T	R	G	P	S	T	Y	K	I	P	A	F	G	S	I	P	T	E	F	R	V	S	L	L	R	D	C	P	N	K	K	A	I	Y	A	S	K	A	V	G	E	P	P	L
Template Known Secondary structure		S																						T					B		.	T	T	S		B				S	T	T	T	S					G	G	G	S		S								S	S				T	T	S	G	G	G	B				S	S	G	G	G
Template Predicted Secondary structure																															.
Template SS confidence
		1186	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.		.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.
		714	.	.	.	.				.	720	.	.	.	.	.	.	.	.	.	730	.	.	.										.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		I	P	V	A	A	.	.	.	A	I	R	N	A	V	K	M	A	T	G	V	A	I	N	.	.	.	.	.	.	.	.	.	T	L	P	L	T	P	K	R	L	Y	E	E	F	H	L	A
Query Conservation							.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	G	A	S	V	F	F	A	I	K	D	A	I	R	A	A	R	A	Q	H	T	N	N	N	T	K	E	L	F	R	L	D	S	P	A	T	P	E	K	I	R	N	A	C	V	D	K
Template Known Secondary structure		G	G	G																			S				T	T							B	S										S			T
Template Predicted Secondary structure
Template SS confidence
		1265	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.