Job Description Q46799 Confidence 39.01% Date Thu Jan 5 12:34:21 GMT 2012 Rank 41 Aligned Residues 91 % Identity 18% Template c2xczA_ PDB info PDB header:immune system Chain: A: PDB Molecule:possible atls1-like light-inducible protein; PDBTitle: crystal structure of macrophage migration inhibitory factor2 homologue from prochlorococcus marinus Resolution 1.64 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.				.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		T	I	N	V	Q	S	G	A	T	E	I	G	Q	G	A	D	T	V	F	S	Q	M	V	A	E	T	V	G	V	P	V	S	D	V	R	V	I	S	T	Q	D	T	D	V	T	.	.	.	P	F	D	P	G	A	F	A	S	R	Q	S	Y	V	A	A	P	A	L	R	S	A	A	L	L	L	K	E	K	I	I	A
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.														.	.
Template Conservation																																																															.	.
Template Sequence		N	I	Q	A	S	V	P	A	V	A	D	A	N	S	L	L	Q	E	L	S	S	K	L	A	E	L	L	G	K	P	E	K	Y	V	M	T	S	L	Q	C	G	V	P	M	T	F	S	G	N	T	E	P	T	C	Y	V	E	V	K	S	I	.	.	G	A	L	D	G	S	R	T	Q	E	V	S	E	L	V	C	G
Template Known Secondary structure						S	S				T	T																	T			G	G	G								S					B	T	T	B		S	S									S	.	.	S				T	T
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	A	V	M	L	H	Q	S	A	M	N	L	T	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	I	E	Q	N	L	G	I	P	A	D	R	I	Y	I	G
Template Known Secondary structure											G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions