Job Description Q46799 Confidence 100.00% Date Thu Jan 5 12:34:21 GMT 2012 Rank 5 Aligned Residues 725 % Identity 25% Template c2w54F_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:xanthine dehydrogenase; PDBTitle: crystal structure of xanthine dehydrogenase from2 rhodobacter capsulatus in complex with bound inhibitor3 pterin-6-aldehyde Resolution 3.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		R	V	D	A	I	A	K	V	T	G	R	A	R	Y	T	D	D	Y	V	M	A	.	G	M	C	Y	A	K	Y	V	R	S	P	I	A	H	G	Y	A	V	S	I	N	D	E	Q	A	R	S	L	P	G	V	L	A	I	F	T	W	E	D	V	P	D	I	P	F	A	T	A	G	H	A	W	T	L	D	E	N	K
Query Conservation																							.
Alig confidence																							.																																																			.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		H	D	S	A	R	A	H	V	T	G	Q	A	R	Y	L	D	D	L	P	C	P	A	N	T	L	H	L	A	F	G	L	S	T	E	A	S	A	A	I	T	G	L	D	L	E	P	V	R	E	S	P	G	V	I	A	V	F	T	A	A	D	L	P	H	D	N	D	A	S	P	A	P	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T							T					G	G	G	S				T	T												S	S														S	T	T							G	G	G		S	S						S	S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	T	A	D	R	A	L	L	T	R	H	V	R	H	H	G	D	A	V	A	I	V	V	A	R	D	E	L	T	A	E	K	A	A	Q	L	V	S	I	E	W	Q	E	L	P	V	I	T	T	P	E	A	A	L	A	E	D	A	A	P	I	H	N	G	G	N	L	L	K	Q	S	T	M	S	T	G	N	V	Q
Query Conservation
Alig confidence		.	.																																																																.	.	.	.	.	.
Template Conservation		.	.																																																																.	.	.	.	.	.
Template Sequence		.	.	S	P	E	P	V	L	A	T	G	E	V	H	F	V	G	Q	P	I	F	L	V	A	A	T	S	H	R	A	A	R	I	A	A	R	K	A	R	I	T	Y	A	P	R	P	A	I	L	T	L	D	Q	A	L	A	A	D	S	R	F	E	G	G	P	.	.	.	.	.	.	V	I	W	A	R	G	D	V	E
Template Known Secondary structure		.	.	S				S	S			S				S	T	T									S	S									T	T													S								T		B	S	T	T	S		.	.	.	.	.	.						S
Template Predicted Secondary structure		.	.																																																																.	.	.	.	.	.
Template SS confidence
				81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	I	D	A	A	D	Y	Q	V	Q	G	H	Y	Q	T	P	V	I	Q	H	C	H	M	E	S	V	T	S	L	A	W	M	E	D	D	S	R	I	T	I	V	S	S	T	Q	I	P	H	I	V	R	R	V	V	G	Q	A	L	D	I	P	W	S	C	V	R	V	I	K	P	F	V	G	G	G	F	G	N	K
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		T	A	L	A	G	A	A	H	L	A	E	G	C	F	E	I	G	G	Q	E	H	F	Y	L	E	G	Q	A	A	L	A	L	P	A	.	E	G	G	V	V	I	H	C	S	S	Q	H	P	S	E	I	Q	H	K	V	A	H	A	L	G	L	A	F	H	D	V	R	V	E	M	R	R	M	G	G	G	F	G	G	K
Template Known Secondary structure						T		S												B					S	S										.	T	T									S														T			G	G	G							B		S			T	T	T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		241	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Q	D	V	L	E	E	.	P	M	A	A	F	L	T	S	K	L	G	G	I	P	V	K	V	S	L	S	R	E	E	C	F	L	A	T	R	T	R	H	A	F	T	I	D	G	Q	M	G	V	N	R	D	G	T	L	K	G	Y	S	L	D	V	L	S	N	T	G	A	Y	A	S	H	G	H	S	I	A	S	A	G
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		E	S	Q	G	N	H	L	A	I	A	C	A	V	A	A	R	A	T	G	R	P	C	K	M	R	Y	D	R	D	D	D	M	V	I	T	G	K	R	H	D	F	R	I	R	Y	R	I	G	A	D	A	S	G	K	L	L	G	A	D	F	V	H	L	A	R	C	G	W	S	A	D	L	S	L	P	V	C	D	R	A
Template Known Secondary structure		S	S	T	T															S	S															S			B													S	S	S															S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.				.	.	.
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		G	N	K	V	A	Y	L	Y	P	R	C	A	Y	A	Y	S	S	K	T	C	Y	T	N	L	P	S	A	G	A	M	R	G	Y	G	A	P	Q	V	V	F	A	V	E	S	M	L	D	D	A	A	T	A	L	G	I	D	P	V	E	I	R	L	R	N	A	A	R	E	G	D	A	N	P	L	.	.	.	T	G	K
Query Conservation																																																																												.	.	.
Alig confidence																																																																												.	.	.
Template Conservation
Template Sequence		M	L	H	A	D	G	S	Y	F	V	P	A	L	R	I	E	S	H	R	L	R	T	N	T	Q	S	N	T	A	F	R	G	F	G	G	P	Q	G	A	L	G	M	E	R	A	I	E	H	L	A	R	G	M	G	R	D	P	A	E	L	R	A	L	N	F	Y	D	P	P	E	K	K	T	Q	T	T	H	Y	G	Q
Template Known Secondary structure				T	T	T	T	T	B			S	S											S	S							T	T	T	T																			T	T									T	T	B					.					B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.				.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		R	I	Y	S	A	G	L	P	E	C	L	E	K	G	R	K	I	F	E	W	E	K	R	R	A	.	.	.	E	C	Q	N	Q	Q	G	N	L	R	R	G	V	G	V	A	C	F	S	Y	T	S	N	T	W	P	V	G	V	E	I	A	G	A	R	L	L	M	N	Q	D	G	T	I	N	V	Q	S	G	A	T	E
Query Conservation																											.	.	.
Alig confidence																											.	.	.
Template Conservation
Template Sequence		E	V	A	D	C	V	L	G	E	L	V	T	R	L	Q	K	S	A	N	F	T	T	R	R	A	E	I	A	A	W	N	S	T	N	R	T	L	A	R	G	I	A	L	S	P	V	K	F	G	I	S	F	T	L	T	H	L	N	Q	A	G	A	L	V	Q	I	Y	T	D	G	S	V	A	L	N	H	G	G	T	E
Template Known Secondary structure		B																		T																S	S															S		S	S	G	G	G											T	T	S							S			B
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	Q	G	A	D	T	V	F	S	Q	M	V	A	E	T	V	G	V	P	V	S	D	V	R	V	I	S	T	Q	D	T	D	V	T	P	F	D	P	G	A	F	A	S	R	Q	S	Y	V	A	A	P	A	L	R	S	A	A	L	L	L	K	E	K	I	I	A	H	A	A	V	M	L	H	Q	S	A	M	N	L
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		M	G	Q	G	L	H	A	K	M	V	Q	V	A	A	A	V	L	G	I	D	P	V	Q	V	R	I	T	A	.	T	D	T	S	K	V	P	N	T	S	A	T	A	A	S	S	G	A	D	M	N	G	M	A	V	K	D	A	C	E	T	L	R	G	R	L	A	G	F	V	A	A	R	E	G	C	A	A	R	D	V
Template Known Secondary structure		S	S	S															T	S		G	G	G						.			T	T	T	S		S				S		T	T																													T	T	S		G	G	G
Template Predicted Secondary structure																														.
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.											.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	I	K	G	H	I	V	L	V	E	R	P	E	E	P	L	M	S	L	K	D	L	A	M	D	A	F	Y	H	P	E	R	.	.	.	.	.	.	.	.	.	.	G	G	Q	L	S	A	E	S	S	I	K	T	T	T	N	P	P	A	F	G	C	T	F	V	D	L	T	V	D	I	A	L	C	K	V	T	I
Query Conservation																																			.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		I	F	D	A	G	Q	V	Q	A	S	G	K	S	.	.	.	.	W	R	F	A	E	I	V	A	A	A	Y	M	A	R	I	S	L	S	A	T	G	F	Y	A	T	P	K	L	S	W	D	R	L	R	G	Q	G	R	P	F	L	Y	F	A	Y	G	A	A	I	T	E	V	V	I	D	R	L	T	G	E	N	R	I
Template Known Secondary structure					T	T					T	T			.	.	.	.													T	T													S					T	T	T	T						S															T	T	T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.					580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.		690	.	.	.	.	.	.	.	.		.	700	.
Predicted Secondary structure																																																																				.										.
Query SS confidence																																																																				.										.
Query Sequence		N	R	I	L	N	V	H	D	S	G	H	I	L	N	P	L	L	A	E	G	Q	V	H	G	G	M	G	M	G	I	G	W	A	L	F	E	E	M	I	I	D	A	K	S	G	V	V	R	N	P	N	L	L	D	Y	K	M	P	T	M	P	D	L	P	Q	L	.	E	S	A	F	V	E	I	N	E	.	P	Q	S
Query Conservation																																																																				.										.
Alig confidence																																											.																									.										.
Template Conservation																																											.
Template Sequence		L	R	T	D	I	L	H	D	A	G	A	S	L	N	P	A	L	D	I	G	Q	I	E	G	A	Y	V	Q	G	A	G	W	L	T	T	E	E	L	V	W	D	.	H	C	G	R	L	M	T	H	A	P	S	T	Y	K	I	P	A	F	S	D	R	P	R	I	F	N	V	A	L	W	D	Q	P	N	R	E	E	T
Template Known Secondary structure											B	S		S																				T	T	T					B		.	T	T	S		B	S			S	T	T	T	S					G	G	G	S		S												S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.		.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
		702	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.			.	.	.	.	.	.	.	.	730	.	.	.	.	.			.	.	.	.	740	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.															.	.
Query SS confidence																						.	.															.	.
Query Sequence		A	Y	G	H	K	S	L	G	E	P	P	I	I	P	V	A	A	A	I	R	.	.	N	A	V	K	M	A	T	G	V	A	I	N	T	L	.	.	P	L	T	P	K	R	L	Y	E	E	F	H	L	A
Query Conservation																						.	.															.	.
Alig confidence																						.	.															.	.
Template Conservation
Template Sequence		I	F	R	S	K	A	V	G	E	P	P	F	L	L	G	I	S	A	F	L	A	L	H	D	A	C	A	A	C	G	P	H	W	P	D	L	Q	A	P	A	T	P	E	A	V	L	A	A	V	R	R	A
Template Known Secondary structure		G	G	G	B				S	S	G	G	G	G	G	G													T	T		S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		722	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.